Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS25130 and QEN71_RS25135 are separated by 36 nucleotides QEN71_RS25135 and QEN71_RS25140 overlap by 4 nucleotides QEN71_RS25140 and QEN71_RS25145 are separated by 6 nucleotides
QEN71_RS25130: QEN71_RS25130 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 5,593,567 to 5,594,619
_RS25130
QEN71_RS25135: QEN71_RS25135 - ABC transporter ATP-binding protein, at 5,594,656 to 5,595,465
_RS25135
QEN71_RS25140: QEN71_RS25140 - iron ABC transporter permease, at 5,595,462 to 5,596,511
_RS25140
QEN71_RS25145: QEN71_RS25145 - TonB-dependent receptor, at 5,596,518 to 5,598,473
_RS25145
Position (kb) 5595
5596
5597 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5594.550 kb on + strand at 5594.550 kb on + strand at 5594.550 kb on + strand at 5594.551 kb on - strand at 5594.551 kb on - strand at 5594.551 kb on - strand at 5594.551 kb on - strand at 5594.551 kb on - strand at 5594.551 kb on - strand at 5594.619 kb on + strand at 5594.619 kb on + strand at 5594.619 kb on + strand at 5594.619 kb on + strand at 5594.619 kb on + strand at 5594.620 kb on - strand at 5594.620 kb on - strand at 5594.620 kb on - strand at 5594.620 kb on - strand at 5594.620 kb on - strand at 5594.620 kb on - strand at 5594.620 kb on - strand at 5594.620 kb on - strand at 5594.625 kb on + strand at 5594.625 kb on + strand at 5594.625 kb on + strand at 5594.625 kb on + strand at 5594.626 kb on - strand at 5594.626 kb on - strand at 5594.871 kb on + strand, within QEN71_RS25135 at 5594.871 kb on + strand, within QEN71_RS25135 at 5594.871 kb on + strand, within QEN71_RS25135 at 5594.871 kb on + strand, within QEN71_RS25135 at 5594.872 kb on - strand, within QEN71_RS25135 at 5594.872 kb on - strand, within QEN71_RS25135 at 5594.872 kb on - strand, within QEN71_RS25135 at 5594.872 kb on - strand, within QEN71_RS25135 at 5594.872 kb on - strand, within QEN71_RS25135 at 5595.083 kb on + strand, within QEN71_RS25135 at 5595.084 kb on - strand, within QEN71_RS25135 at 5595.084 kb on - strand, within QEN71_RS25135 at 5595.084 kb on - strand, within QEN71_RS25135 at 5595.084 kb on - strand, within QEN71_RS25135 at 5595.267 kb on + strand, within QEN71_RS25135 at 5595.267 kb on + strand, within QEN71_RS25135 at 5595.267 kb on + strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.268 kb on - strand, within QEN71_RS25135 at 5595.365 kb on + strand, within QEN71_RS25135 at 5595.365 kb on + strand, within QEN71_RS25135 at 5595.365 kb on + strand, within QEN71_RS25135 at 5595.739 kb on + strand, within QEN71_RS25140 at 5595.739 kb on + strand, within QEN71_RS25140 at 5595.739 kb on + strand, within QEN71_RS25140 at 5595.740 kb on - strand, within QEN71_RS25140 at 5595.740 kb on - strand, within QEN71_RS25140 at 5595.740 kb on - strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.189 kb on + strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.190 kb on - strand, within QEN71_RS25140 at 5596.546 kb on + strand at 5596.546 kb on + strand at 5596.546 kb on + strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.547 kb on - strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.570 kb on + strand at 5596.571 kb on - strand at 5596.571 kb on - strand at 5596.571 kb on - strand at 5596.571 kb on - strand at 5596.577 kb on - strand at 5596.577 kb on - strand at 5596.627 kb on + strand at 5596.627 kb on + strand at 5596.627 kb on + strand at 5596.628 kb on - strand at 5596.628 kb on - strand at 5596.648 kb on + strand at 5596.649 kb on - strand at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.806 kb on - strand, within QEN71_RS25145 at 5596.930 kb on + strand, within QEN71_RS25145 at 5596.930 kb on + strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.931 kb on - strand, within QEN71_RS25145 at 5596.954 kb on + strand, within QEN71_RS25145 at 5596.954 kb on + strand, within QEN71_RS25145 at 5596.954 kb on + strand, within QEN71_RS25145 at 5596.955 kb on - strand, within QEN71_RS25145 at 5596.955 kb on - strand, within QEN71_RS25145 at 5596.955 kb on - strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.970 kb on + strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5596.971 kb on - strand, within QEN71_RS25145 at 5597.023 kb on + strand, within QEN71_RS25145 at 5597.023 kb on + strand, within QEN71_RS25145 at 5597.083 kb on + strand, within QEN71_RS25145 at 5597.084 kb on - strand, within QEN71_RS25145 at 5597.084 kb on - strand, within QEN71_RS25145 at 5597.089 kb on + strand, within QEN71_RS25145 at 5597.089 kb on + strand, within QEN71_RS25145 at 5597.090 kb on - strand, within QEN71_RS25145 at 5597.090 kb on - strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.092 kb on + strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.093 kb on - strand, within QEN71_RS25145 at 5597.167 kb on + strand, within QEN71_RS25145 at 5597.168 kb on - strand, within QEN71_RS25145 at 5597.173 kb on + strand, within QEN71_RS25145 at 5597.173 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.182 kb on + strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.183 kb on - strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.185 kb on + strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.186 kb on - strand, within QEN71_RS25145 at 5597.213 kb on - strand, within QEN71_RS25145 at 5597.267 kb on - strand, within QEN71_RS25145 at 5597.267 kb on - strand, within QEN71_RS25145 at 5597.308 kb on + strand, within QEN71_RS25145 at 5597.309 kb on - strand, within QEN71_RS25145 at 5597.398 kb on + strand, within QEN71_RS25145 at 5597.398 kb on + strand, within QEN71_RS25145 at 5597.399 kb on - strand, within QEN71_RS25145 at 5597.399 kb on - strand, within QEN71_RS25145 at 5597.399 kb on - strand, within QEN71_RS25145 at 5597.425 kb on + strand, within QEN71_RS25145 at 5597.431 kb on + strand, within QEN71_RS25145 at 5597.431 kb on + strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145 at 5597.432 kb on - strand, within QEN71_RS25145
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 5,594,550 + -0.4 5,594,550 + +0.2 5,594,550 + +0.8 5,594,551 - -0.7 5,594,551 - -0.8 5,594,551 - +0.4 5,594,551 - +0.6 5,594,551 - -0.4 5,594,551 - -0.1 5,594,619 + -0.1 5,594,619 + -0.3 5,594,619 + +0.1 5,594,619 + +0.1 5,594,619 + +0.8 5,594,620 - +0.9 5,594,620 - +0.0 5,594,620 - -0.8 5,594,620 - -0.4 5,594,620 - +1.1 5,594,620 - -0.5 5,594,620 - -0.9 5,594,620 - -1.4 5,594,625 + +2.6 5,594,625 + -1.8 5,594,625 + +0.3 5,594,625 + +0.3 5,594,626 - -1.6 5,594,626 - -0.7 5,594,871 + QEN71_RS25135 0.27 -0.1 5,594,871 + QEN71_RS25135 0.27 +0.2 5,594,871 + QEN71_RS25135 0.27 -0.3 5,594,871 + QEN71_RS25135 0.27 +0.3 5,594,872 - QEN71_RS25135 0.27 +0.2 5,594,872 - QEN71_RS25135 0.27 +0.4 5,594,872 - QEN71_RS25135 0.27 -1.9 5,594,872 - QEN71_RS25135 0.27 +0.5 5,594,872 - QEN71_RS25135 0.27 -0.8 5,595,083 + QEN71_RS25135 0.53 -0.3 5,595,084 - QEN71_RS25135 0.53 +1.8 5,595,084 - QEN71_RS25135 0.53 +0.1 5,595,084 - QEN71_RS25135 0.53 -0.4 5,595,084 - QEN71_RS25135 0.53 +0.2 5,595,267 + QEN71_RS25135 0.75 -0.5 5,595,267 + QEN71_RS25135 0.75 -0.1 5,595,267 + QEN71_RS25135 0.75 +0.7 5,595,268 - QEN71_RS25135 0.76 -0.3 5,595,268 - QEN71_RS25135 0.76 -1.0 5,595,268 - QEN71_RS25135 0.76 +1.1 5,595,268 - QEN71_RS25135 0.76 -0.5 5,595,268 - QEN71_RS25135 0.76 +1.1 5,595,268 - QEN71_RS25135 0.76 -0.4 5,595,268 - QEN71_RS25135 0.76 -0.6 5,595,268 - QEN71_RS25135 0.76 +0.9 5,595,365 + QEN71_RS25135 0.88 +0.3 5,595,365 + QEN71_RS25135 0.88 +1.0 5,595,365 + QEN71_RS25135 0.88 -0.3 5,595,739 + QEN71_RS25140 0.26 +0.1 5,595,739 + QEN71_RS25140 0.26 +0.3 5,595,739 + QEN71_RS25140 0.26 -0.9 5,595,740 - QEN71_RS25140 0.26 +0.1 5,595,740 - QEN71_RS25140 0.26 +0.1 5,595,740 - QEN71_RS25140 0.26 -1.2 5,596,189 + QEN71_RS25140 0.69 -0.1 5,596,189 + QEN71_RS25140 0.69 -0.1 5,596,189 + QEN71_RS25140 0.69 +0.1 5,596,189 + QEN71_RS25140 0.69 -0.5 5,596,189 + QEN71_RS25140 0.69 +0.1 5,596,189 + QEN71_RS25140 0.69 -0.7 5,596,189 + QEN71_RS25140 0.69 -1.9 5,596,190 - QEN71_RS25140 0.69 +0.5 5,596,190 - QEN71_RS25140 0.69 +1.1 5,596,190 - QEN71_RS25140 0.69 -0.5 5,596,190 - QEN71_RS25140 0.69 +0.6 5,596,190 - QEN71_RS25140 0.69 -0.4 5,596,190 - QEN71_RS25140 0.69 -1.0 5,596,546 + +0.5 5,596,546 + +0.6 5,596,546 + -0.6 5,596,547 - -0.8 5,596,547 - -1.5 5,596,547 - +0.6 5,596,547 - -1.9 5,596,547 - +1.2 5,596,570 + +0.2 5,596,570 + -0.7 5,596,570 + +0.0 5,596,570 + +0.3 5,596,570 + -0.9 5,596,570 + +0.4 5,596,570 + +0.1 5,596,570 + -0.0 5,596,570 + +0.8 5,596,571 - -2.1 5,596,571 - +0.9 5,596,571 - -0.7 5,596,571 - +0.6 5,596,577 - -1.4 5,596,577 - +1.1 5,596,627 + +0.9 5,596,627 + -0.3 5,596,627 + -1.7 5,596,628 - +0.5 5,596,628 - +1.2 5,596,648 + +0.1 5,596,649 - -0.9 5,596,806 - QEN71_RS25145 0.15 -1.5 5,596,806 - QEN71_RS25145 0.15 -0.5 5,596,806 - QEN71_RS25145 0.15 -0.3 5,596,806 - QEN71_RS25145 0.15 -1.1 5,596,930 + QEN71_RS25145 0.21 +0.6 5,596,930 + QEN71_RS25145 0.21 -0.6 5,596,931 - QEN71_RS25145 0.21 -0.1 5,596,931 - QEN71_RS25145 0.21 -0.8 5,596,931 - QEN71_RS25145 0.21 -0.2 5,596,931 - QEN71_RS25145 0.21 -0.5 5,596,931 - QEN71_RS25145 0.21 -2.5 5,596,954 + QEN71_RS25145 0.22 -0.7 5,596,954 + QEN71_RS25145 0.22 -0.1 5,596,954 + QEN71_RS25145 0.22 +0.3 5,596,955 - QEN71_RS25145 0.22 -0.7 5,596,955 - QEN71_RS25145 0.22 +0.4 5,596,955 - QEN71_RS25145 0.22 +0.5 5,596,970 + QEN71_RS25145 0.23 -0.8 5,596,970 + QEN71_RS25145 0.23 +1.2 5,596,970 + QEN71_RS25145 0.23 -0.5 5,596,970 + QEN71_RS25145 0.23 +0.1 5,596,970 + QEN71_RS25145 0.23 -0.0 5,596,970 + QEN71_RS25145 0.23 -0.2 5,596,971 - QEN71_RS25145 0.23 -0.0 5,596,971 - QEN71_RS25145 0.23 +0.7 5,596,971 - QEN71_RS25145 0.23 -0.2 5,596,971 - QEN71_RS25145 0.23 +0.2 5,596,971 - QEN71_RS25145 0.23 -0.2 5,596,971 - QEN71_RS25145 0.23 -0.9 5,596,971 - QEN71_RS25145 0.23 +0.2 5,597,023 + QEN71_RS25145 0.26 +1.1 5,597,023 + QEN71_RS25145 0.26 -0.3 5,597,083 + QEN71_RS25145 0.29 -0.3 5,597,084 - QEN71_RS25145 0.29 -1.0 5,597,084 - QEN71_RS25145 0.29 -0.6 5,597,089 + QEN71_RS25145 0.29 +0.1 5,597,089 + QEN71_RS25145 0.29 +0.2 5,597,090 - QEN71_RS25145 0.29 +0.1 5,597,090 - QEN71_RS25145 0.29 -1.6 5,597,092 + QEN71_RS25145 0.29 -2.9 5,597,092 + QEN71_RS25145 0.29 +1.1 5,597,092 + QEN71_RS25145 0.29 -0.2 5,597,092 + QEN71_RS25145 0.29 +0.0 5,597,092 + QEN71_RS25145 0.29 -0.1 5,597,092 + QEN71_RS25145 0.29 +0.1 5,597,093 - QEN71_RS25145 0.29 +0.1 5,597,093 - QEN71_RS25145 0.29 +0.1 5,597,093 - QEN71_RS25145 0.29 +0.1 5,597,093 - QEN71_RS25145 0.29 -0.3 5,597,093 - QEN71_RS25145 0.29 -0.3 5,597,167 + QEN71_RS25145 0.33 -0.8 5,597,168 - QEN71_RS25145 0.33 +0.1 5,597,173 + QEN71_RS25145 0.33 -0.2 5,597,173 + QEN71_RS25145 0.33 +0.9 5,597,182 + QEN71_RS25145 0.34 -0.4 5,597,182 + QEN71_RS25145 0.34 -0.5 5,597,182 + QEN71_RS25145 0.34 -1.2 5,597,182 + QEN71_RS25145 0.34 -0.1 5,597,182 + QEN71_RS25145 0.34 -0.9 5,597,182 + QEN71_RS25145 0.34 +0.2 5,597,182 + QEN71_RS25145 0.34 +0.4 5,597,183 - QEN71_RS25145 0.34 +0.6 5,597,183 - QEN71_RS25145 0.34 -0.1 5,597,183 - QEN71_RS25145 0.34 -0.4 5,597,183 - QEN71_RS25145 0.34 -0.1 5,597,183 - QEN71_RS25145 0.34 -0.6 5,597,183 - QEN71_RS25145 0.34 +0.9 5,597,183 - QEN71_RS25145 0.34 -0.5 5,597,183 - QEN71_RS25145 0.34 -0.9 5,597,183 - QEN71_RS25145 0.34 -1.1 5,597,183 - QEN71_RS25145 0.34 -1.8 5,597,185 + QEN71_RS25145 0.34 -0.0 5,597,185 + QEN71_RS25145 0.34 -0.5 5,597,185 + QEN71_RS25145 0.34 -0.7 5,597,185 + QEN71_RS25145 0.34 +1.3 5,597,185 + QEN71_RS25145 0.34 -0.2 5,597,185 + QEN71_RS25145 0.34 -0.6 5,597,185 + QEN71_RS25145 0.34 +0.1 5,597,186 - QEN71_RS25145 0.34 -0.7 5,597,186 - QEN71_RS25145 0.34 -1.1 5,597,186 - QEN71_RS25145 0.34 -1.5 5,597,186 - QEN71_RS25145 0.34 -0.4 5,597,186 - QEN71_RS25145 0.34 -0.3 5,597,186 - QEN71_RS25145 0.34 -0.3 5,597,186 - QEN71_RS25145 0.34 +1.2 5,597,213 - QEN71_RS25145 0.36 +0.1 5,597,267 - QEN71_RS25145 0.38 -1.1 5,597,267 - QEN71_RS25145 0.38 -0.3 5,597,308 + QEN71_RS25145 0.40 -0.2 5,597,309 - QEN71_RS25145 0.40 +0.1 5,597,398 + QEN71_RS25145 0.45 -0.2 5,597,398 + QEN71_RS25145 0.45 -0.5 5,597,399 - QEN71_RS25145 0.45 +0.5 5,597,399 - QEN71_RS25145 0.45 -1.5 5,597,399 - QEN71_RS25145 0.45 -0.3 5,597,425 + QEN71_RS25145 0.46 +0.2 5,597,431 + QEN71_RS25145 0.47 -0.8 5,597,431 + QEN71_RS25145 0.47 -0.8 5,597,432 - QEN71_RS25145 0.47 -1.5 5,597,432 - QEN71_RS25145 0.47 +0.4 5,597,432 - QEN71_RS25145 0.47 -1.1 5,597,432 - QEN71_RS25145 0.47 -0.5
Or see this region's nucleotide sequence