Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS19165 and QEN71_RS19170 are separated by 395 nucleotides QEN71_RS19170 and QEN71_RS19175 are separated by 5 nucleotides
QEN71_RS19165: QEN71_RS19165 - glycosyltransferase family 1 protein, at 4,261,167 to 4,262,459
_RS19165
QEN71_RS19170: QEN71_RS19170 - ATP-binding cassette domain-containing protein, at 4,262,855 to 4,265,551
_RS19170
QEN71_RS19175: QEN71_RS19175 - glycosyltransferase, at 4,265,557 to 4,266,558
_RS19175
Position (kb)
4262
4263
4264
4265
4266 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4261.918 kb on + strand, within QEN71_RS19165 at 4262.079 kb on + strand, within QEN71_RS19165 at 4262.155 kb on + strand, within QEN71_RS19165 at 4262.156 kb on - strand, within QEN71_RS19165 at 4262.210 kb on + strand, within QEN71_RS19165 at 4262.212 kb on + strand, within QEN71_RS19165 at 4262.212 kb on + strand, within QEN71_RS19165 at 4262.212 kb on + strand, within QEN71_RS19165 at 4262.212 kb on + strand, within QEN71_RS19165 at 4262.213 kb on - strand, within QEN71_RS19165 at 4262.213 kb on - strand, within QEN71_RS19165 at 4262.213 kb on - strand, within QEN71_RS19165 at 4262.380 kb on + strand at 4262.380 kb on + strand at 4262.381 kb on - strand at 4262.381 kb on - strand at 4262.381 kb on - strand at 4262.451 kb on + strand at 4262.451 kb on + strand at 4262.736 kb on + strand at 4262.737 kb on - strand at 4262.737 kb on - strand at 4263.080 kb on + strand at 4263.404 kb on + strand, within QEN71_RS19170 at 4263.404 kb on + strand, within QEN71_RS19170 at 4263.405 kb on - strand, within QEN71_RS19170 at 4263.419 kb on + strand, within QEN71_RS19170 at 4263.419 kb on + strand, within QEN71_RS19170 at 4263.427 kb on + strand, within QEN71_RS19170 at 4263.428 kb on - strand, within QEN71_RS19170 at 4263.513 kb on - strand, within QEN71_RS19170 at 4263.740 kb on + strand, within QEN71_RS19170 at 4263.740 kb on + strand, within QEN71_RS19170 at 4263.741 kb on - strand, within QEN71_RS19170 at 4264.061 kb on + strand, within QEN71_RS19170 at 4264.062 kb on - strand, within QEN71_RS19170 at 4264.062 kb on - strand, within QEN71_RS19170 at 4264.188 kb on - strand, within QEN71_RS19170 at 4264.289 kb on + strand, within QEN71_RS19170 at 4264.595 kb on + strand, within QEN71_RS19170 at 4264.596 kb on - strand, within QEN71_RS19170 at 4264.596 kb on - strand, within QEN71_RS19170 at 4264.738 kb on + strand, within QEN71_RS19170 at 4264.739 kb on - strand, within QEN71_RS19170 at 4264.753 kb on + strand, within QEN71_RS19170 at 4264.754 kb on - strand, within QEN71_RS19170 at 4264.899 kb on + strand, within QEN71_RS19170 at 4264.899 kb on + strand, within QEN71_RS19170 at 4265.024 kb on + strand, within QEN71_RS19170 at 4265.024 kb on + strand, within QEN71_RS19170 at 4265.025 kb on - strand, within QEN71_RS19170 at 4265.025 kb on - strand, within QEN71_RS19170 at 4265.549 kb on + strand at 4265.549 kb on + strand at 4265.550 kb on - strand at 4265.550 kb on - strand at 4265.550 kb on - strand at 4265.875 kb on + strand, within QEN71_RS19175 at 4266.243 kb on + strand, within QEN71_RS19175 at 4266.266 kb on + strand, within QEN71_RS19175 at 4266.266 kb on + strand, within QEN71_RS19175 at 4266.471 kb on + strand at 4266.471 kb on + strand at 4266.472 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 4,261,918 + QEN71_RS19165 0.58 -0.7 4,262,079 + QEN71_RS19165 0.71 +3.0 4,262,155 + QEN71_RS19165 0.76 -0.4 4,262,156 - QEN71_RS19165 0.76 -1.4 4,262,210 + QEN71_RS19165 0.81 +2.0 4,262,212 + QEN71_RS19165 0.81 -0.6 4,262,212 + QEN71_RS19165 0.81 -0.2 4,262,212 + QEN71_RS19165 0.81 -0.5 4,262,212 + QEN71_RS19165 0.81 +0.4 4,262,213 - QEN71_RS19165 0.81 -0.3 4,262,213 - QEN71_RS19165 0.81 -0.1 4,262,213 - QEN71_RS19165 0.81 +0.8 4,262,380 + -1.5 4,262,380 + +0.7 4,262,381 - -0.2 4,262,381 - -1.0 4,262,381 - +0.1 4,262,451 + -0.2 4,262,451 + +0.1 4,262,736 + +0.7 4,262,737 - -0.3 4,262,737 - +0.4 4,263,080 + -1.1 4,263,404 + QEN71_RS19170 0.20 -0.1 4,263,404 + QEN71_RS19170 0.20 +0.0 4,263,405 - QEN71_RS19170 0.20 -1.9 4,263,419 + QEN71_RS19170 0.21 +1.3 4,263,419 + QEN71_RS19170 0.21 -1.0 4,263,427 + QEN71_RS19170 0.21 -0.3 4,263,428 - QEN71_RS19170 0.21 -0.0 4,263,513 - QEN71_RS19170 0.24 +2.0 4,263,740 + QEN71_RS19170 0.33 +0.5 4,263,740 + QEN71_RS19170 0.33 +0.4 4,263,741 - QEN71_RS19170 0.33 -0.2 4,264,061 + QEN71_RS19170 0.45 -0.7 4,264,062 - QEN71_RS19170 0.45 -0.1 4,264,062 - QEN71_RS19170 0.45 -0.5 4,264,188 - QEN71_RS19170 0.49 +0.3 4,264,289 + QEN71_RS19170 0.53 +1.0 4,264,595 + QEN71_RS19170 0.65 +0.1 4,264,596 - QEN71_RS19170 0.65 -0.2 4,264,596 - QEN71_RS19170 0.65 +0.3 4,264,738 + QEN71_RS19170 0.70 -0.3 4,264,739 - QEN71_RS19170 0.70 +0.3 4,264,753 + QEN71_RS19170 0.70 -1.1 4,264,754 - QEN71_RS19170 0.70 +0.1 4,264,899 + QEN71_RS19170 0.76 -0.0 4,264,899 + QEN71_RS19170 0.76 -0.9 4,265,024 + QEN71_RS19170 0.80 -0.3 4,265,024 + QEN71_RS19170 0.80 +0.3 4,265,025 - QEN71_RS19170 0.80 +0.5 4,265,025 - QEN71_RS19170 0.80 -0.8 4,265,549 + -1.7 4,265,549 + +0.1 4,265,550 - +1.2 4,265,550 - -0.1 4,265,550 - +0.6 4,265,875 + QEN71_RS19175 0.32 -0.5 4,266,243 + QEN71_RS19175 0.68 +1.8 4,266,266 + QEN71_RS19175 0.71 +1.2 4,266,266 + QEN71_RS19175 0.71 +0.2 4,266,471 + -0.6 4,266,471 + -0.5 4,266,472 - +0.1
Or see this region's nucleotide sequence