Experiment: LB_noSalt with Chloride 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS00435 and QEN71_RS00440 are separated by 379 nucleotides QEN71_RS00440 and QEN71_RS00445 are separated by 26 nucleotides QEN71_RS00445 and QEN71_RS00450 overlap by 17 nucleotides QEN71_RS00450 and QEN71_RS00455 are separated by 214 nucleotides
QEN71_RS00435: QEN71_RS00435 - DUF3857 and transglutaminase domain-containing protein, at 93,614 to 95,626
_RS00435
QEN71_RS00440: QEN71_RS00440 - PepSY-associated TM helix domain-containing protein, at 96,006 to 96,728
_RS00440
QEN71_RS00445: QEN71_RS00445 - XRE family transcriptional regulator, at 96,755 to 97,096
_RS00445
QEN71_RS00450: QEN71_RS00450 - type II toxin-antitoxin system RelE/ParE family toxin, at 97,080 to 97,454
_RS00450
QEN71_RS00455: QEN71_RS00455 - XdhC family protein, at 97,669 to 98,697
_RS00455
Position (kb) 96
97 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 95.025 kb on + strand, within QEN71_RS00435 at 95.026 kb on - strand, within QEN71_RS00435 at 95.026 kb on - strand, within QEN71_RS00435 at 95.052 kb on + strand, within QEN71_RS00435 at 95.052 kb on + strand, within QEN71_RS00435 at 95.052 kb on + strand, within QEN71_RS00435 at 95.052 kb on + strand, within QEN71_RS00435 at 95.053 kb on - strand, within QEN71_RS00435 at 95.053 kb on - strand, within QEN71_RS00435 at 95.053 kb on - strand, within QEN71_RS00435 at 95.053 kb on - strand, within QEN71_RS00435 at 95.053 kb on - strand, within QEN71_RS00435 at 95.053 kb on - strand, within QEN71_RS00435 at 95.053 kb on - strand, within QEN71_RS00435 at 95.304 kb on + strand, within QEN71_RS00435 at 95.304 kb on + strand, within QEN71_RS00435 at 95.304 kb on + strand, within QEN71_RS00435 at 95.305 kb on - strand, within QEN71_RS00435 at 95.352 kb on + strand, within QEN71_RS00435 at 95.352 kb on + strand, within QEN71_RS00435 at 95.352 kb on + strand, within QEN71_RS00435 at 95.352 kb on + strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.353 kb on - strand, within QEN71_RS00435 at 95.355 kb on + strand, within QEN71_RS00435 at 95.355 kb on + strand, within QEN71_RS00435 at 95.356 kb on - strand, within QEN71_RS00435 at 95.356 kb on - strand, within QEN71_RS00435 at 95.356 kb on - strand, within QEN71_RS00435 at 95.356 kb on - strand, within QEN71_RS00435 at 95.472 kb on + strand at 95.472 kb on + strand at 95.580 kb on + strand at 95.580 kb on + strand at 95.581 kb on - strand at 95.656 kb on + strand at 95.656 kb on + strand at 95.657 kb on - strand at 95.657 kb on - strand at 95.657 kb on - strand at 95.783 kb on + strand at 95.789 kb on + strand at 95.789 kb on + strand at 95.789 kb on + strand at 95.789 kb on + strand at 95.790 kb on - strand at 95.794 kb on - strand at 95.903 kb on - strand at 95.954 kb on + strand at 95.954 kb on + strand at 95.954 kb on + strand at 95.954 kb on + strand at 95.955 kb on - strand at 95.955 kb on - strand at 95.955 kb on - strand at 96.317 kb on + strand, within QEN71_RS00440 at 96.317 kb on + strand, within QEN71_RS00440 at 96.317 kb on + strand, within QEN71_RS00440 at 96.317 kb on + strand, within QEN71_RS00440 at 96.318 kb on - strand, within QEN71_RS00440 at 96.318 kb on - strand, within QEN71_RS00440 at 96.348 kb on - strand, within QEN71_RS00440 at 96.348 kb on - strand, within QEN71_RS00440 at 96.477 kb on + strand, within QEN71_RS00440 at 96.477 kb on + strand, within QEN71_RS00440 at 96.499 kb on + strand, within QEN71_RS00440 at 96.593 kb on + strand, within QEN71_RS00440 at 96.594 kb on - strand, within QEN71_RS00440 at 96.670 kb on + strand at 96.671 kb on - strand at 96.860 kb on + strand, within QEN71_RS00445 at 96.860 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.894 kb on + strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.895 kb on - strand, within QEN71_RS00445 at 96.996 kb on + strand, within QEN71_RS00445 at 96.996 kb on + strand, within QEN71_RS00445 at 96.996 kb on + strand, within QEN71_RS00445 at 96.996 kb on + strand, within QEN71_RS00445 at 96.997 kb on - strand, within QEN71_RS00445 at 96.997 kb on - strand, within QEN71_RS00445 at 97.118 kb on + strand, within QEN71_RS00450 at 97.118 kb on + strand, within QEN71_RS00450 at 97.118 kb on + strand, within QEN71_RS00450 at 97.118 kb on + strand, within QEN71_RS00450 at 97.119 kb on - strand, within QEN71_RS00450 at 97.119 kb on - strand, within QEN71_RS00450 at 97.138 kb on + strand, within QEN71_RS00450 at 97.139 kb on - strand, within QEN71_RS00450 at 97.171 kb on + strand, within QEN71_RS00450 at 97.172 kb on - strand, within QEN71_RS00450 at 97.241 kb on - strand, within QEN71_RS00450 at 97.241 kb on - strand, within QEN71_RS00450 at 97.241 kb on - strand, within QEN71_RS00450 at 97.241 kb on - strand, within QEN71_RS00450 at 97.243 kb on - strand, within QEN71_RS00450 at 97.253 kb on - strand, within QEN71_RS00450 at 97.278 kb on + strand, within QEN71_RS00450 at 97.279 kb on - strand, within QEN71_RS00450 at 97.308 kb on + strand, within QEN71_RS00450 at 97.308 kb on + strand, within QEN71_RS00450 at 97.309 kb on - strand, within QEN71_RS00450 at 97.309 kb on - strand, within QEN71_RS00450 at 97.311 kb on + strand, within QEN71_RS00450 at 97.461 kb on + strand at 97.529 kb on - strand at 97.529 kb on - strand at 97.564 kb on - strand at 97.604 kb on - strand at 97.604 kb on - strand at 97.671 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB_noSalt with Chloride 200 mM remove 95,025 + QEN71_RS00435 0.70 +0.3 95,026 - QEN71_RS00435 0.70 -0.2 95,026 - QEN71_RS00435 0.70 -2.9 95,052 + QEN71_RS00435 0.71 +0.4 95,052 + QEN71_RS00435 0.71 +0.9 95,052 + QEN71_RS00435 0.71 +0.4 95,052 + QEN71_RS00435 0.71 +0.7 95,053 - QEN71_RS00435 0.71 +0.9 95,053 - QEN71_RS00435 0.71 +1.1 95,053 - QEN71_RS00435 0.71 -0.0 95,053 - QEN71_RS00435 0.71 +0.5 95,053 - QEN71_RS00435 0.71 -0.1 95,053 - QEN71_RS00435 0.71 -1.5 95,053 - QEN71_RS00435 0.71 +0.9 95,304 + QEN71_RS00435 0.84 +0.3 95,304 + QEN71_RS00435 0.84 -0.5 95,304 + QEN71_RS00435 0.84 -0.2 95,305 - QEN71_RS00435 0.84 +0.3 95,352 + QEN71_RS00435 0.86 +0.2 95,352 + QEN71_RS00435 0.86 -0.5 95,352 + QEN71_RS00435 0.86 -1.3 95,352 + QEN71_RS00435 0.86 -0.9 95,353 - QEN71_RS00435 0.86 -0.2 95,353 - QEN71_RS00435 0.86 -0.8 95,353 - QEN71_RS00435 0.86 +0.6 95,353 - QEN71_RS00435 0.86 -1.0 95,353 - QEN71_RS00435 0.86 -0.1 95,353 - QEN71_RS00435 0.86 -0.7 95,353 - QEN71_RS00435 0.86 -0.4 95,353 - QEN71_RS00435 0.86 +0.3 95,355 + QEN71_RS00435 0.86 -0.0 95,355 + QEN71_RS00435 0.86 -0.1 95,356 - QEN71_RS00435 0.87 -0.7 95,356 - QEN71_RS00435 0.87 -0.1 95,356 - QEN71_RS00435 0.87 -0.2 95,356 - QEN71_RS00435 0.87 -0.3 95,472 + +1.7 95,472 + +0.4 95,580 + -0.2 95,580 + +0.5 95,581 - -0.0 95,656 + +0.2 95,656 + +0.3 95,657 - +0.1 95,657 - +0.1 95,657 - -0.7 95,783 + +0.3 95,789 + +0.3 95,789 + -0.6 95,789 + -1.7 95,789 + -0.7 95,790 - -2.4 95,794 - -1.2 95,903 - +0.2 95,954 + +0.2 95,954 + -0.1 95,954 + -0.3 95,954 + -0.2 95,955 - +0.3 95,955 - -0.2 95,955 - +1.1 96,317 + QEN71_RS00440 0.43 -0.2 96,317 + QEN71_RS00440 0.43 +0.2 96,317 + QEN71_RS00440 0.43 -0.9 96,317 + QEN71_RS00440 0.43 +0.1 96,318 - QEN71_RS00440 0.43 +1.4 96,318 - QEN71_RS00440 0.43 +0.2 96,348 - QEN71_RS00440 0.47 +0.2 96,348 - QEN71_RS00440 0.47 -0.9 96,477 + QEN71_RS00440 0.65 +0.9 96,477 + QEN71_RS00440 0.65 +0.9 96,499 + QEN71_RS00440 0.68 +0.3 96,593 + QEN71_RS00440 0.81 -0.3 96,594 - QEN71_RS00440 0.81 -0.7 96,670 + +0.1 96,671 - -1.0 96,860 + QEN71_RS00445 0.31 -0.5 96,860 + QEN71_RS00445 0.31 -0.8 96,894 + QEN71_RS00445 0.41 -0.9 96,894 + QEN71_RS00445 0.41 +0.3 96,894 + QEN71_RS00445 0.41 +1.7 96,894 + QEN71_RS00445 0.41 +0.7 96,894 + QEN71_RS00445 0.41 -1.7 96,894 + QEN71_RS00445 0.41 +0.7 96,894 + QEN71_RS00445 0.41 -1.1 96,894 + QEN71_RS00445 0.41 -1.1 96,894 + QEN71_RS00445 0.41 -0.5 96,894 + QEN71_RS00445 0.41 -0.3 96,894 + QEN71_RS00445 0.41 -0.2 96,894 + QEN71_RS00445 0.41 -1.4 96,894 + QEN71_RS00445 0.41 +0.0 96,894 + QEN71_RS00445 0.41 +0.3 96,894 + QEN71_RS00445 0.41 -2.2 96,894 + QEN71_RS00445 0.41 -0.5 96,895 - QEN71_RS00445 0.41 -0.2 96,895 - QEN71_RS00445 0.41 -0.2 96,895 - QEN71_RS00445 0.41 +0.2 96,895 - QEN71_RS00445 0.41 +0.4 96,895 - QEN71_RS00445 0.41 +0.5 96,895 - QEN71_RS00445 0.41 -1.0 96,895 - QEN71_RS00445 0.41 -0.1 96,895 - QEN71_RS00445 0.41 -2.0 96,895 - QEN71_RS00445 0.41 +0.2 96,895 - QEN71_RS00445 0.41 +0.8 96,895 - QEN71_RS00445 0.41 -0.5 96,895 - QEN71_RS00445 0.41 +0.5 96,895 - QEN71_RS00445 0.41 +0.3 96,895 - QEN71_RS00445 0.41 -0.4 96,895 - QEN71_RS00445 0.41 +0.2 96,895 - QEN71_RS00445 0.41 +1.6 96,895 - QEN71_RS00445 0.41 +0.1 96,895 - QEN71_RS00445 0.41 +0.8 96,996 + QEN71_RS00445 0.70 -0.0 96,996 + QEN71_RS00445 0.70 -0.5 96,996 + QEN71_RS00445 0.70 -2.7 96,996 + QEN71_RS00445 0.70 -0.8 96,997 - QEN71_RS00445 0.71 -1.0 96,997 - QEN71_RS00445 0.71 -1.0 97,118 + QEN71_RS00450 0.10 -0.6 97,118 + QEN71_RS00450 0.10 -0.6 97,118 + QEN71_RS00450 0.10 -1.8 97,118 + QEN71_RS00450 0.10 -0.1 97,119 - QEN71_RS00450 0.10 -2.7 97,119 - QEN71_RS00450 0.10 -0.2 97,138 + QEN71_RS00450 0.15 -2.2 97,139 - QEN71_RS00450 0.16 +0.6 97,171 + QEN71_RS00450 0.24 +0.9 97,172 - QEN71_RS00450 0.25 -0.4 97,241 - QEN71_RS00450 0.43 +0.9 97,241 - QEN71_RS00450 0.43 -0.3 97,241 - QEN71_RS00450 0.43 +0.2 97,241 - QEN71_RS00450 0.43 +0.3 97,243 - QEN71_RS00450 0.43 -0.4 97,253 - QEN71_RS00450 0.46 -1.5 97,278 + QEN71_RS00450 0.53 -0.2 97,279 - QEN71_RS00450 0.53 -0.1 97,308 + QEN71_RS00450 0.61 +0.2 97,308 + QEN71_RS00450 0.61 -0.5 97,309 - QEN71_RS00450 0.61 -0.4 97,309 - QEN71_RS00450 0.61 +0.9 97,311 + QEN71_RS00450 0.62 +0.7 97,461 + -0.2 97,529 - -1.2 97,529 - +0.5 97,564 - +0.7 97,604 - -0.1 97,604 - -1.1 97,671 - -1.7
Or see this region's nucleotide sequence