Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04190

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
49,630	-				-0.5
49,640	+				+1.0
49,652	+				+1.1
49,708	-				-1.9
49,789	-				-0.0
49,793	+				-0.0
49,793	+				+1.3
49,793	+				-0.4
49,801	-				-0.8
49,801	-				+1.5
49,801	-				+0.7
49,803	+				+1.1
49,813	+				-0.1
49,855	+				+1.3
50,035	+				-0.3
50,043	-				+0.2
50,043	-				-0.5
50,117	-				-0.0
50,132	+		MIT1002_04189	0.11	-0.2
50,156	+		MIT1002_04189	0.17	+2.3
50,175	+		MIT1002_04189	0.22	+1.5
50,175	+		MIT1002_04189	0.22	-2.4
50,180	+		MIT1002_04189	0.24	+1.1
50,180	+		MIT1002_04189	0.24	-0.2
50,183	-		MIT1002_04189	0.24	+1.1
50,216	+		MIT1002_04189	0.33	-0.3
50,269	-		MIT1002_04189	0.47	-0.0
50,314	-		MIT1002_04189	0.59	-0.6
50,314	-		MIT1002_04189	0.59	+0.1
50,314	-		MIT1002_04189	0.59	-1.4
50,428	-		MIT1002_04189	0.88	-2.2
50,438	-				+1.8
50,522	+				-1.1
50,522	+				-0.5
50,522	+				-1.2
50,522	+				+0.1
50,522	+				-0.7
50,522	+				+0.3
50,522	+				+0.4
50,530	-				-1.4
50,530	-				-2.4
50,530	-				-0.8
50,532	+				+1.0
50,555	+				+2.3
50,609	-				-0.7
50,623	+				-2.7
50,642	+		MIT1002_04190	0.14	+0.9
50,642	+		MIT1002_04190	0.14	-2.2
50,666	-		MIT1002_04190	0.22	+0.6
50,923	+				-1.2
50,954	+				+0.4
50,956	+				-1.1
51,034	+				-1.0
51,081	+				-0.1
51,241	+		MIT1002_04191	0.25	+2.2
51,256	+		MIT1002_04191	0.28	+0.4
51,256	+		MIT1002_04191	0.28	+1.1
51,264	-		MIT1002_04191	0.30	-1.6
51,282	+		MIT1002_04191	0.33	-2.5
51,404	-		MIT1002_04191	0.56	-0.1
51,447	-		MIT1002_04191	0.64	+0.3
51,546	+		MIT1002_04191	0.83	+1.3
51,546	+		MIT1002_04191	0.83	+0.6
51,554	-		MIT1002_04191	0.84	+1.1
51,554	-		MIT1002_04191	0.84	+0.8
51,603	+				-1.8
51,610	+				-0.3
51,642	+				-0.3
51,642	+				+1.1
51,685	-				-0.4
51,727	+				+2.1
51,760	-				+0.3
51,794	+				+0.1
51,802	-				-0.4
51,824	+				-1.1
51,836	+				+0.6
51,836	+				-1.0
51,844	-				-1.3