Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03930

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
4,405,383	-				-0.2
4,405,390	+		MIT1002_03929	0.11	+1.4
4,405,517	+		MIT1002_03929	0.24	-1.6
4,405,535	-		MIT1002_03929	0.26	-0.3
4,405,580	+		MIT1002_03929	0.31	-2.6
4,405,588	-		MIT1002_03929	0.32	+1.1
4,405,644	-		MIT1002_03929	0.37	-0.3
4,405,766	+		MIT1002_03929	0.50	-1.3
4,405,807	+		MIT1002_03929	0.55	-0.2
4,405,815	-		MIT1002_03929	0.56	+1.1
4,405,815	-		MIT1002_03929	0.56	-1.0
4,405,872	+		MIT1002_03929	0.62	-3.2
4,405,888	-		MIT1002_03929	0.63	-1.9
4,405,898	-		MIT1002_03929	0.64	+1.0
4,405,900	-		MIT1002_03929	0.65	-1.0
4,405,919	-		MIT1002_03929	0.67	-0.5
4,405,932	-		MIT1002_03929	0.68	-0.8
4,405,964	+		MIT1002_03929	0.71	+0.9
4,405,974	-		MIT1002_03929	0.73	+0.5
4,406,049	-		MIT1002_03929	0.80	+0.1
4,406,091	+		MIT1002_03929	0.85	-1.0
4,406,091	+		MIT1002_03929	0.85	+0.5
4,406,137	+		MIT1002_03929	0.90	-0.6
4,406,182	+				+0.3
4,406,190	-				-1.1
4,406,190	-				-0.8
4,406,195	-				-0.5
4,406,195	-				+0.5
4,406,226	-				-2.4
4,406,267	+				+2.7
4,406,285	-				-0.7
4,406,295	+				+0.4
4,406,303	-				-0.4
4,406,319	+				-0.0
4,406,320	+				-0.0
4,406,327	-				-0.6
4,406,343	+				-0.3
4,406,351	-				-0.8
4,406,405	+				-1.2
4,406,415	-				+1.3
4,406,540	-		MIT1002_03930	0.38	+0.9
4,406,664	+		MIT1002_03930	0.69	-0.0
4,406,669	+		MIT1002_03930	0.70	+0.9
4,406,683	+		MIT1002_03930	0.74	+0.1
4,406,698	+		MIT1002_03930	0.77	-0.1
4,406,706	-		MIT1002_03930	0.79	-1.8
4,406,711	-		MIT1002_03930	0.80	-0.0
4,406,722	+		MIT1002_03930	0.83	-0.7
4,406,786	+				-0.1
4,406,786	+				+0.3
4,406,796	+				+1.4
4,406,826	+				-0.4
4,406,826	+				+0.1
4,407,011	+				-0.1
4,407,051	+				+1.2
4,407,059	-				+2.0
4,407,143	+				-0.5
4,407,158	-				-1.3
4,407,277	+				+0.3
4,407,285	-				+2.0
4,407,337	-				-0.8
4,407,359	-				-1.0
4,407,379	+				+1.0
4,407,423	-		MIT1002_03931	0.16	-0.8
4,407,438	-		MIT1002_03931	0.18	-0.7
4,407,438	-		MIT1002_03931	0.18	+0.6
4,407,456	-		MIT1002_03931	0.20	-0.6
4,407,458	+		MIT1002_03931	0.20	+0.7
4,407,524	+		MIT1002_03931	0.29	-1.4
4,407,532	-		MIT1002_03931	0.30	-1.2
4,407,547	-		MIT1002_03931	0.32	-1.6
4,407,566	-		MIT1002_03931	0.35	-0.5
4,407,580	+		MIT1002_03931	0.37	-2.0
4,407,587	-		MIT1002_03931	0.38	+0.3
4,407,624	-		MIT1002_03931	0.43	+0.7
4,407,729	+		MIT1002_03931	0.57	+0.6
4,407,773	+		MIT1002_03931	0.63	-0.1