Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03874

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
4,339,792	+		MIT1002_03873	0.40	-0.7
4,339,800	-		MIT1002_03873	0.40	+1.4
4,339,800	-		MIT1002_03873	0.40	+2.8
4,339,856	+		MIT1002_03873	0.44	-1.1
4,339,859	-		MIT1002_03873	0.44	-0.1
4,339,859	-		MIT1002_03873	0.44	-0.0
4,339,884	+		MIT1002_03873	0.46	-0.2
4,339,884	-		MIT1002_03873	0.46	+2.0
4,339,897	+		MIT1002_03873	0.47	-0.6
4,339,909	+		MIT1002_03873	0.48	-2.0
4,339,926	-		MIT1002_03873	0.49	+0.2
4,340,021	+		MIT1002_03873	0.56	+0.4
4,340,026	+		MIT1002_03873	0.57	+1.3
4,340,026	+		MIT1002_03873	0.57	+0.5
4,340,036	-		MIT1002_03873	0.57	-2.1
4,340,086	-		MIT1002_03873	0.61	+0.4
4,340,090	+		MIT1002_03873	0.61	+1.3
4,340,124	+		MIT1002_03873	0.64	+0.3
4,340,129	+		MIT1002_03873	0.64	+0.2
4,340,132	-		MIT1002_03873	0.64	+0.9
4,340,184	+		MIT1002_03873	0.68	-0.3
4,340,273	-		MIT1002_03873	0.75	-0.3
4,340,296	+		MIT1002_03873	0.76	-0.4
4,340,296	-		MIT1002_03873	0.76	+0.2
4,340,303	+		MIT1002_03873	0.77	+1.0
4,340,305	+		MIT1002_03873	0.77	-2.3
4,340,305	+		MIT1002_03873	0.77	-1.7
4,340,305	-		MIT1002_03873	0.77	-0.8
4,340,306	-		MIT1002_03873	0.77	+1.4
4,340,469	-		MIT1002_03873	0.89	+1.5
4,340,617	+				-0.4
4,340,683	-				+2.0
4,340,773	+		MIT1002_03874	0.11	+4.3
4,340,797	+		MIT1002_03874	0.13	-0.3
4,340,797	+		MIT1002_03874	0.13	+2.1
4,340,797	+		MIT1002_03874	0.13	-1.2
4,340,805	-		MIT1002_03874	0.14	+0.4
4,340,827	+		MIT1002_03874	0.16	+0.6
4,340,837	-		MIT1002_03874	0.17	-1.7
4,340,890	+		MIT1002_03874	0.22	+0.5
4,340,898	-		MIT1002_03874	0.23	+0.3
4,340,929	+		MIT1002_03874	0.26	-0.1
4,340,937	-		MIT1002_03874	0.27	+2.0
4,341,054	-		MIT1002_03874	0.38	-2.7
4,341,092	-		MIT1002_03874	0.42	-2.4
4,341,178	-		MIT1002_03874	0.50	+1.3
4,341,180	+		MIT1002_03874	0.50	-0.1
4,341,180	+		MIT1002_03874	0.50	-1.3
4,341,188	-		MIT1002_03874	0.51	+0.7
4,341,204	+		MIT1002_03874	0.53	+0.3
4,341,213	-		MIT1002_03874	0.54	+1.0
4,341,213	-		MIT1002_03874	0.54	-0.0
4,341,215	+		MIT1002_03874	0.54	-0.3
4,341,291	+		MIT1002_03874	0.61	-1.1
4,341,291	+		MIT1002_03874	0.61	-1.2
4,341,299	-		MIT1002_03874	0.62	-1.3
4,341,299	-		MIT1002_03874	0.62	+1.6
4,341,299	-		MIT1002_03874	0.62	+0.3
4,341,331	+		MIT1002_03874	0.65	+1.9
4,341,346	-		MIT1002_03874	0.67	+1.6
4,341,378	-		MIT1002_03874	0.70	-0.5
4,341,395	+		MIT1002_03874	0.72	-0.5
4,341,403	-		MIT1002_03874	0.72	+1.6
4,341,404	-		MIT1002_03874	0.72	-0.4
4,341,574	+		MIT1002_03874	0.89	-1.9
4,341,589	+				-2.2
4,341,610	+				+0.3
4,341,620	-				-1.2
4,341,636	+				+0.3
4,341,644	-				+0.0
4,341,661	+				+1.7
4,341,661	+				-1.8
4,341,661	-				-1.4
4,341,669	-				-0.8
4,341,755	-				+0.6
4,341,781	-				+0.4
4,341,794	+				+0.9
4,341,817	+				+0.1
4,341,959	+				+2.8
4,341,974	+				+0.1
4,342,028	-				-0.7
4,342,044	+		MIT1002_03875	0.10	+1.3
4,342,052	-		MIT1002_03875	0.11	-1.6
4,342,052	-		MIT1002_03875	0.11	-0.4
4,342,052	-		MIT1002_03875	0.11	+2.8
4,342,052	-		MIT1002_03875	0.11	+1.2
4,342,065	+		MIT1002_03875	0.12	-0.1
4,342,070	+		MIT1002_03875	0.13	-1.0
4,342,070	+		MIT1002_03875	0.13	+0.3
4,342,070	+		MIT1002_03875	0.13	-0.4
4,342,078	-		MIT1002_03875	0.14	-1.6
4,342,082	+		MIT1002_03875	0.14	-0.0
4,342,082	+		MIT1002_03875	0.14	+1.8
4,342,095	-		MIT1002_03875	0.15	+0.7
4,342,130	+		MIT1002_03875	0.18	+0.3
4,342,130	-		MIT1002_03875	0.18	+0.1
4,342,148	-		MIT1002_03875	0.20	+1.6
4,342,180	+		MIT1002_03875	0.23	+1.0
4,342,183	+		MIT1002_03875	0.23	-0.8
4,342,183	+		MIT1002_03875	0.23	+1.2
4,342,190	+		MIT1002_03875	0.24	-2.9
4,342,191	-		MIT1002_03875	0.24	+0.1
4,342,191	-		MIT1002_03875	0.24	-0.3
4,342,222	-		MIT1002_03875	0.27	+0.5
4,342,222	-		MIT1002_03875	0.27	-0.7
4,342,228	+		MIT1002_03875	0.28	+1.0
4,342,234	-		MIT1002_03875	0.28	+1.3
4,342,246	-		MIT1002_03875	0.29	-2.5
4,342,283	-		MIT1002_03875	0.33	-1.4
4,342,328	-		MIT1002_03875	0.37	-0.6
4,342,332	+		MIT1002_03875	0.38	-3.1
4,342,332	+		MIT1002_03875	0.38	+1.6
4,342,340	-		MIT1002_03875	0.38	+2.6
4,342,359	-		MIT1002_03875	0.40	+0.5
4,342,378	-		MIT1002_03875	0.42	+1.0
4,342,402	+		MIT1002_03875	0.44	+3.2
4,342,403	+		MIT1002_03875	0.44	+1.8
4,342,428	+		MIT1002_03875	0.47	+0.2
4,342,428	+		MIT1002_03875	0.47	+0.8
4,342,428	+		MIT1002_03875	0.47	-0.2
4,342,519	+		MIT1002_03875	0.55	+1.4
4,342,596	+		MIT1002_03875	0.63	-0.5
4,342,601	+		MIT1002_03875	0.63	+1.6
4,342,620	-		MIT1002_03875	0.65	-2.0
4,342,659	+		MIT1002_03875	0.69	+0.1
4,342,675	+		MIT1002_03875	0.70	-0.9