Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03815

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
4,261,091	-		MIT1002_03814	0.11	+2.2
4,261,153	-		MIT1002_03814	0.17	-1.2
4,261,158	+		MIT1002_03814	0.18	-0.8
4,261,166	-		MIT1002_03814	0.18	-1.1
4,261,191	-		MIT1002_03814	0.21	+0.9
4,261,212	-		MIT1002_03814	0.22	-0.2
4,261,226	+		MIT1002_03814	0.24	-1.2
4,261,231	+		MIT1002_03814	0.24	-0.4
4,261,250	+		MIT1002_03814	0.26	-1.0
4,261,256	-		MIT1002_03814	0.27	-0.6
4,261,267	-		MIT1002_03814	0.28	-0.7
4,261,316	-		MIT1002_03814	0.32	-0.8
4,261,374	+		MIT1002_03814	0.37	-1.3
4,261,374	+		MIT1002_03814	0.37	-0.7
4,261,402	+		MIT1002_03814	0.40	+0.5
4,261,426	+		MIT1002_03814	0.42	-0.2
4,261,467	+		MIT1002_03814	0.46	-0.5
4,261,467	+		MIT1002_03814	0.46	+3.0
4,261,467	+		MIT1002_03814	0.46	-0.5
4,261,467	+		MIT1002_03814	0.46	+1.1
4,261,523	+		MIT1002_03814	0.51	+0.1
4,261,525	+		MIT1002_03814	0.51	+1.6
4,261,546	+		MIT1002_03814	0.53	-0.6
4,261,546	+		MIT1002_03814	0.53	+1.3
4,261,594	+		MIT1002_03814	0.58	-0.2
4,261,608	-		MIT1002_03814	0.59	+0.6
4,261,615	+		MIT1002_03814	0.60	-1.5
4,261,623	-		MIT1002_03814	0.60	-1.1
4,261,634	+		MIT1002_03814	0.61	+0.2
4,261,646	+		MIT1002_03814	0.62	-1.2
4,261,755	+		MIT1002_03814	0.72	-0.3
4,261,802	+		MIT1002_03814	0.77	+1.0
4,261,802	+		MIT1002_03814	0.77	+2.7
4,261,805	-		MIT1002_03814	0.77	+1.7
4,261,810	-		MIT1002_03814	0.77	-0.1
4,261,846	+		MIT1002_03814	0.81	+0.4
4,261,887	-		MIT1002_03814	0.84	-1.6
4,261,887	-		MIT1002_03814	0.84	+0.2
4,261,924	+		MIT1002_03814	0.88	+0.8
4,261,954	+				-0.3
4,261,980	+				-1.8
4,261,992	+				-0.3
4,261,992	+				+1.1
4,261,992	+				+0.1
4,261,992	+				-0.3
4,261,992	+				+0.5
4,261,992	+				+1.6
4,261,998	-				-1.8
4,261,998	-				+1.6
4,262,000	-				+0.0
4,262,000	-				-0.5
4,262,000	-				-0.2
4,262,014	+				+0.6
4,262,048	+				+1.3
4,262,113	-				-0.4
4,262,127	+				-0.6
4,262,146	+				+0.4
4,262,165	+				-1.7
4,262,185	-				-1.9
4,262,185	-				-0.4
4,262,203	-				+0.4
4,262,249	+				+1.7
4,262,346	+				+0.5
4,262,350	-				+0.4
4,262,396	+		MIT1002_03815	0.10	-0.2
4,262,421	-		MIT1002_03815	0.11	+1.6
4,262,421	-		MIT1002_03815	0.11	-0.3
4,262,423	+		MIT1002_03815	0.11	+2.8
4,262,455	+		MIT1002_03815	0.12	-0.1
4,262,455	+		MIT1002_03815	0.12	+0.8
4,262,463	-		MIT1002_03815	0.12	-1.0
4,262,463	-		MIT1002_03815	0.12	+1.4
4,262,576	-		MIT1002_03815	0.16	-0.3
4,262,763	-		MIT1002_03815	0.22	-0.9
4,262,790	+		MIT1002_03815	0.23	+0.2
4,262,790	-		MIT1002_03815	0.23	-1.9
4,262,806	+		MIT1002_03815	0.23	+0.7
4,262,818	+		MIT1002_03815	0.24	+1.5
4,262,826	-		MIT1002_03815	0.24	-0.7
4,262,838	+		MIT1002_03815	0.24	+2.0
4,262,848	+		MIT1002_03815	0.24	-0.4
4,262,848	+		MIT1002_03815	0.24	-0.2
4,262,848	+		MIT1002_03815	0.24	+0.9
4,262,856	-		MIT1002_03815	0.25	-0.1
4,262,899	-		MIT1002_03815	0.26	+1.3
4,262,957	-		MIT1002_03815	0.28	-1.2
4,262,958	-		MIT1002_03815	0.28	+1.3
4,263,005	+		MIT1002_03815	0.29	+1.5
4,263,018	-		MIT1002_03815	0.30	+0.3
4,263,024	-		MIT1002_03815	0.30	+0.4
4,263,032	-		MIT1002_03815	0.30	+2.2
4,263,036	+		MIT1002_03815	0.30	+1.1
4,263,038	-		MIT1002_03815	0.30	-0.8
4,263,067	-		MIT1002_03815	0.31	+1.2
4,263,105	+		MIT1002_03815	0.33	-1.6
4,263,117	+		MIT1002_03815	0.33	+0.3
4,263,128	+		MIT1002_03815	0.33	-1.0
4,263,136	-		MIT1002_03815	0.33	-0.0
4,263,182	+		MIT1002_03815	0.35	-0.4
4,263,182	+		MIT1002_03815	0.35	-0.3
4,263,190	-		MIT1002_03815	0.35	-1.7
4,263,220	+		MIT1002_03815	0.36	-1.4
4,263,297	-		MIT1002_03815	0.39	+1.0
4,263,375	-		MIT1002_03815	0.41	+0.8
4,263,445	-		MIT1002_03815	0.43	-1.0
4,263,461	-		MIT1002_03815	0.44	+2.1
4,263,461	-		MIT1002_03815	0.44	+0.4
4,263,491	-		MIT1002_03815	0.45	-0.1
4,263,514	-		MIT1002_03815	0.45	+1.3
4,263,567	+		MIT1002_03815	0.47	-2.1
4,263,585	+		MIT1002_03815	0.48	+0.4
4,263,585	+		MIT1002_03815	0.48	-1.6
4,263,606	+		MIT1002_03815	0.48	+1.1
4,263,614	-		MIT1002_03815	0.48	+0.1
4,263,678	-		MIT1002_03815	0.51	-0.0
4,263,695	-		MIT1002_03815	0.51	-2.2
4,263,695	-		MIT1002_03815	0.51	-0.0
4,263,717	+		MIT1002_03815	0.52	+0.7
4,263,783	+		MIT1002_03815	0.54	+2.6
4,263,791	-		MIT1002_03815	0.54	-0.5
4,263,791	-		MIT1002_03815	0.54	-0.6
4,263,827	+		MIT1002_03815	0.55	-0.5
4,263,886	-		MIT1002_03815	0.57	-0.0
4,263,939	-		MIT1002_03815	0.59	+0.1
4,263,941	-		MIT1002_03815	0.59	-0.6
4,264,005	+		MIT1002_03815	0.61	+1.6
4,264,005	+		MIT1002_03815	0.61	+0.3
4,264,080	+		MIT1002_03815	0.63	-1.5
4,264,090	-		MIT1002_03815	0.63	+0.5
4,264,259	+		MIT1002_03815	0.69	+1.6
4,264,280	+		MIT1002_03815	0.69	+0.7
4,264,308	+		MIT1002_03815	0.70	-1.8
4,264,360	-		MIT1002_03815	0.72	+1.0
4,264,428	+		MIT1002_03815	0.74	+0.4
4,264,428	+		MIT1002_03815	0.74	-1.6
4,264,432	+		MIT1002_03815	0.74	-1.1
4,264,440	-		MIT1002_03815	0.74	+1.0
4,264,496	-		MIT1002_03815	0.76	+2.0
4,264,528	+		MIT1002_03815	0.77	+0.1
4,264,531	-		MIT1002_03815	0.77	-0.3
4,264,533	+		MIT1002_03815	0.77	-0.4
4,264,533	+		MIT1002_03815	0.77	+1.3
4,264,560	+		MIT1002_03815	0.78	-0.5
4,264,621	-		MIT1002_03815	0.80	+0.1
4,264,639	+		MIT1002_03815	0.81	+0.1
4,264,644	+		MIT1002_03815	0.81	-0.7
4,264,667	-		MIT1002_03815	0.82	+0.7
4,264,667	-		MIT1002_03815	0.82	+1.2
4,264,667	-		MIT1002_03815	0.82	+1.1
4,264,680	+		MIT1002_03815	0.82	+1.0
4,264,688	+		MIT1002_03815	0.82	-2.5
4,264,733	+		MIT1002_03815	0.84	+0.3
4,264,743	+		MIT1002_03815	0.84	+2.3
4,264,755	+		MIT1002_03815	0.84	+1.6
4,264,756	+		MIT1002_03815	0.84	-0.4
4,264,994	+				-2.7
4,264,998	-				+0.6
4,265,054	-				-0.1
4,265,109	+				+0.4
4,265,197	+				-0.3
4,265,396	+				-0.2
4,265,434	+				-1.1
4,265,493	-				+1.0
4,265,511	+				-0.6
4,265,518	+				-0.4
4,265,526	-				-0.8
4,265,600	+				-1.8
4,265,601	+				+0.8
4,265,608	-				-0.2
4,265,608	-				+1.3
4,265,803	+		MIT1002_03816	0.20	-1.0
4,265,847	-		MIT1002_03816	0.29	+1.6
4,266,015	-		MIT1002_03816	0.66	-0.5
4,266,038	+		MIT1002_03816	0.72	+0.5
4,266,049	-		MIT1002_03816	0.74	+1.3
4,266,060	+		MIT1002_03816	0.76	-0.5
4,266,068	-		MIT1002_03816	0.78	-1.2
4,266,068	-		MIT1002_03816	0.78	-0.3
4,266,068	-		MIT1002_03816	0.78	+1.4
4,266,068	-		MIT1002_03816	0.78	-1.2
4,266,134	-				-0.8
4,266,184	-				+0.2