Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03715

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
4,148,956	+		MIT1002_03714	0.39	-1.5
4,149,076	+		MIT1002_03714	0.46	-1.4
4,149,114	-		MIT1002_03714	0.49	-1.1
4,149,115	-		MIT1002_03714	0.49	+2.5
4,149,122	+		MIT1002_03714	0.49	-1.8
4,149,211	-		MIT1002_03714	0.55	+0.3
4,149,260	+		MIT1002_03714	0.58	+0.2
4,149,267	-		MIT1002_03714	0.58	+1.0
4,149,299	-		MIT1002_03714	0.60	-0.6
4,149,306	+		MIT1002_03714	0.61	-0.7
4,149,372	+		MIT1002_03714	0.65	+0.7
4,149,387	+		MIT1002_03714	0.66	-0.5
4,149,387	+		MIT1002_03714	0.66	-1.8
4,149,387	+		MIT1002_03714	0.66	-1.9
4,149,390	-		MIT1002_03714	0.66	-1.0
4,149,611	+		MIT1002_03714	0.79	-2.6
4,149,613	-		MIT1002_03714	0.80	-0.9
4,149,615	+		MIT1002_03714	0.80	-0.2
4,149,621	+		MIT1002_03714	0.80	+1.3
4,149,623	-		MIT1002_03714	0.80	-2.4
4,149,728	+		MIT1002_03714	0.87	-1.3
4,149,731	-		MIT1002_03714	0.87	-1.8
4,149,744	+		MIT1002_03714	0.88	+0.6
4,149,794	-				+1.8
4,149,794	-				-0.5
4,149,804	-				+0.8
4,149,818	-				-1.0
4,149,902	+				-0.3
4,149,949	+				-1.2
4,149,949	+				-1.0
4,149,949	+				+1.6
4,149,951	+				-1.3
4,149,957	-				+0.2
4,149,957	-				-0.6
4,149,957	-				+0.5
4,149,957	-				+1.1
4,149,957	-				-0.8
4,149,977	+		MIT1002_03715	0.11	+1.4
4,149,985	-		MIT1002_03715	0.14	-0.8
4,149,985	-		MIT1002_03715	0.14	+0.6
4,150,082	+		MIT1002_03715	0.46	+0.6
4,150,142	-		MIT1002_03715	0.65	-0.2
4,150,144	-		MIT1002_03715	0.66	-0.4
4,150,144	-		MIT1002_03715	0.66	+0.3
4,150,163	-		MIT1002_03715	0.72	-0.3
4,150,168	-		MIT1002_03715	0.74	-1.6
4,150,252	+				-0.4
4,150,301	-				+0.9
4,150,346	+				+1.9
4,150,382	+		MIT1002_03716	0.10	-2.9
4,150,392	-		MIT1002_03716	0.11	+0.7
4,150,401	+		MIT1002_03716	0.11	-0.1
4,150,409	-		MIT1002_03716	0.12	-1.2
4,150,484	+		MIT1002_03716	0.18	-0.2
4,150,492	-		MIT1002_03716	0.18	+1.7
4,150,555	+		MIT1002_03716	0.23	-0.5
4,150,591	-		MIT1002_03716	0.25	+0.2
4,150,607	+		MIT1002_03716	0.26	-0.3
4,150,616	+		MIT1002_03716	0.27	+1.0
4,150,644	-		MIT1002_03716	0.29	+2.4
4,150,665	+		MIT1002_03716	0.31	+0.9
4,150,668	-		MIT1002_03716	0.31	-1.6
4,150,673	-		MIT1002_03716	0.31	-1.1
4,150,711	-		MIT1002_03716	0.34	-1.5
4,150,717	+		MIT1002_03716	0.34	+0.9
4,150,866	+		MIT1002_03716	0.45	-1.0
4,150,884	-		MIT1002_03716	0.47	-0.6
4,150,902	+		MIT1002_03716	0.48	+0.2
4,150,987	-		MIT1002_03716	0.54	-0.3
4,150,987	-		MIT1002_03716	0.54	-1.0
4,150,989	+		MIT1002_03716	0.54	+0.9
4,150,997	+		MIT1002_03716	0.55	-0.7
4,151,044	+		MIT1002_03716	0.58	+0.2
4,151,155	+		MIT1002_03716	0.66	-1.1
4,151,223	+		MIT1002_03716	0.71	+2.9
4,151,239	-		MIT1002_03716	0.72	+1.0