Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03651

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
4,083,645	-				+0.2
4,083,648	+				+0.3
4,083,656	-				-0.2
4,083,692	-				+0.4
4,083,720	+				+1.0
4,083,771	-		MIT1002_03650	0.12	-2.1
4,083,886	-		MIT1002_03650	0.24	-2.4
4,083,886	-		MIT1002_03650	0.24	-0.8
4,083,886	-		MIT1002_03650	0.24	+0.1
4,083,893	+		MIT1002_03650	0.25	-0.3
4,083,915	+		MIT1002_03650	0.27	+0.1
4,083,937	+		MIT1002_03650	0.30	-0.5
4,083,945	-		MIT1002_03650	0.31	-1.2
4,083,954	+		MIT1002_03650	0.32	-2.3
4,083,962	-		MIT1002_03650	0.32	+0.3
4,084,309	+		MIT1002_03650	0.69	+1.5
4,084,318	-		MIT1002_03650	0.70	+0.2
4,084,329	-		MIT1002_03650	0.71	-1.0
4,084,329	-		MIT1002_03650	0.71	+0.9
4,084,329	-		MIT1002_03650	0.71	+1.0
4,084,390	+		MIT1002_03650	0.77	-0.6
4,084,468	+		MIT1002_03650	0.86	-0.3
4,084,501	+		MIT1002_03650	0.89	-1.0
4,084,514	-				+0.5
4,084,543	-				+0.0
4,084,608	+				+0.3
4,084,647	-				+0.9
4,084,663	-				-1.0
4,084,707	+				+0.8
4,084,807	+		MIT1002_03651	0.11	-0.9
4,084,829	-		MIT1002_03651	0.12	-1.0
4,084,884	-		MIT1002_03651	0.16	-1.8
4,084,940	+		MIT1002_03651	0.19	+1.3
4,084,940	+		MIT1002_03651	0.19	+0.2
4,084,948	-		MIT1002_03651	0.20	-0.8
4,084,948	-		MIT1002_03651	0.20	+0.1
4,084,948	-		MIT1002_03651	0.20	-2.8
4,084,948	-		MIT1002_03651	0.20	+0.6
4,084,968	-		MIT1002_03651	0.21	+0.2
4,084,985	+		MIT1002_03651	0.22	+0.0
4,084,993	-		MIT1002_03651	0.23	-1.6
4,084,993	-		MIT1002_03651	0.23	-2.3
4,085,000	+		MIT1002_03651	0.23	+0.6
4,085,081	+		MIT1002_03651	0.28	+0.0
4,085,261	+		MIT1002_03651	0.40	+1.3
4,085,261	+		MIT1002_03651	0.40	-0.7
4,085,353	+		MIT1002_03651	0.46	-0.3
4,085,361	-		MIT1002_03651	0.46	-0.7
4,085,371	-		MIT1002_03651	0.47	-0.9
4,085,394	-		MIT1002_03651	0.49	+0.2
4,085,462	+		MIT1002_03651	0.53	+0.7
4,085,464	+		MIT1002_03651	0.53	+1.0
4,085,598	+		MIT1002_03651	0.62	-1.3
4,085,598	+		MIT1002_03651	0.62	+1.3
4,085,598	+		MIT1002_03651	0.62	+0.7
4,085,693	+		MIT1002_03651	0.68	-1.5
4,085,693	+		MIT1002_03651	0.68	-0.2
4,085,693	+		MIT1002_03651	0.68	-2.5
4,085,693	+		MIT1002_03651	0.68	-1.3
4,085,693	+		MIT1002_03651	0.68	+1.3
4,085,693	+		MIT1002_03651	0.68	-0.4
4,085,693	+		MIT1002_03651	0.68	+1.1
4,085,701	-		MIT1002_03651	0.68	+0.7
4,085,701	-		MIT1002_03651	0.68	-0.9
4,085,701	-		MIT1002_03651	0.68	+0.0
4,085,701	-		MIT1002_03651	0.68	-0.5
4,085,815	-		MIT1002_03651	0.76	-0.9
4,085,831	+		MIT1002_03651	0.77	-2.3
4,085,895	-		MIT1002_03651	0.81	-1.1
4,085,947	-		MIT1002_03651	0.84	-1.0
4,086,127	-				+1.4
4,086,127	-				-1.6
4,086,158	-				+0.1
4,086,410	-				+0.3
4,086,438	+				+3.0
4,086,441	+				+0.4
4,086,463	-				-0.3
4,086,481	+				-0.2
4,086,481	+				-1.0
4,086,481	+				+0.3
4,086,536	+				+0.6
4,086,536	+				-2.2
4,086,536	+				+1.3
4,086,536	+				+0.0
4,086,536	+				-0.3
4,086,536	+				-0.3
4,086,544	-				+1.4
4,086,544	-				+1.2
4,086,544	-				+0.0
4,086,544	-				-2.2
4,086,544	-				+0.2
4,086,610	+				+0.5
4,086,613	-				-1.0
4,086,618	-				+0.1
4,086,687	-				+0.2
4,086,687	-				+0.1
4,086,790	+		MIT1002_03652	0.15	+0.7
4,086,818	+		MIT1002_03652	0.17	+0.3
4,086,826	-		MIT1002_03652	0.18	-1.2
4,086,855	+		MIT1002_03652	0.20	-1.3
4,086,868	-		MIT1002_03652	0.21	+0.6
4,086,881	+		MIT1002_03652	0.22	+1.1
4,086,970	+		MIT1002_03652	0.29	+0.0
4,086,975	+		MIT1002_03652	0.29	-0.5
4,087,014	-		MIT1002_03652	0.33	+0.8
4,087,016	+		MIT1002_03652	0.33	-1.6
4,087,022	-		MIT1002_03652	0.33	-0.7
4,087,047	-		MIT1002_03652	0.35	-2.4
4,087,058	-		MIT1002_03652	0.36	-0.4
4,087,126	+		MIT1002_03652	0.41	-0.3
4,087,134	-		MIT1002_03652	0.42	-0.9
4,087,146	+		MIT1002_03652	0.43	-0.3