Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03437

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
3,840,789	+		MIT1002_03436	0.59	-2.5
3,840,816	+		MIT1002_03436	0.60	+2.5
3,840,816	+		MIT1002_03436	0.60	+1.2
3,840,816	+		MIT1002_03436	0.60	-1.2
3,840,884	-		MIT1002_03436	0.63	+0.3
3,840,908	-		MIT1002_03436	0.64	+0.3
3,840,908	-		MIT1002_03436	0.64	+0.8
3,841,147	+		MIT1002_03436	0.74	-0.8
3,841,160	-		MIT1002_03436	0.74	+0.7
3,841,161	+		MIT1002_03436	0.74	+1.9
3,841,171	+		MIT1002_03436	0.75	+0.2
3,841,171	+		MIT1002_03436	0.75	-1.6
3,841,177	-		MIT1002_03436	0.75	+1.2
3,841,177	-		MIT1002_03436	0.75	-0.1
3,841,251	+		MIT1002_03436	0.78	+0.4
3,841,282	+		MIT1002_03436	0.79	+3.5
3,841,290	-		MIT1002_03436	0.80	+0.7
3,841,421	+		MIT1002_03436	0.85	+1.7
3,841,571	+				-0.1
3,841,573	+				+0.6
3,841,616	-				-0.5
3,841,616	-				+0.9
3,841,699	-				+1.0
3,841,708	+				-2.9
3,841,722	+				-0.4
3,841,794	+				-0.2
3,841,802	-				+0.2
3,841,828	-				+2.0
3,841,828	-				+0.7
3,841,828	-				-0.1
3,841,868	+				-0.2
3,841,876	-				-1.3
3,841,876	-				+0.2
3,841,913	-		MIT1002_03437	0.12	-1.4
3,841,922	-		MIT1002_03437	0.13	+0.9
3,841,941	-		MIT1002_03437	0.14	-0.1
3,841,941	-		MIT1002_03437	0.14	-0.4
3,841,985	-		MIT1002_03437	0.18	+0.6
3,842,019	-		MIT1002_03437	0.21	-0.6
3,842,062	+		MIT1002_03437	0.25	-0.1
3,842,070	-		MIT1002_03437	0.26	-1.4
3,842,107	-		MIT1002_03437	0.29	-0.8
3,842,261	+		MIT1002_03437	0.43	+0.2
3,842,269	-		MIT1002_03437	0.44	-0.9
3,842,271	+		MIT1002_03437	0.44	+0.0
3,842,281	+		MIT1002_03437	0.45	+2.2
3,842,290	+		MIT1002_03437	0.46	-0.5
3,842,341	-		MIT1002_03437	0.50	+0.5
3,842,396	+		MIT1002_03437	0.55	-1.9
3,842,396	+		MIT1002_03437	0.55	-0.8
3,842,397	-		MIT1002_03437	0.56	+0.0
3,842,404	-		MIT1002_03437	0.56	-0.2
3,842,472	-		MIT1002_03437	0.62	-1.0
3,842,531	-		MIT1002_03437	0.68	-0.2
3,842,651	+		MIT1002_03437	0.79	-0.2
3,842,659	-		MIT1002_03437	0.79	+1.8
3,842,708	-		MIT1002_03437	0.84	+0.5
3,842,772	+		MIT1002_03437	0.89	-0.8
3,842,780	+				+1.0
3,842,879	+				+1.0
3,842,899	-				+0.8
3,842,967	-				-0.3
3,842,968	+				+0.6
3,843,084	-				+1.6
3,843,084	-				-0.2
3,843,219	+		MIT1002_03438	0.15	-1.1
3,843,219	+		MIT1002_03438	0.15	+0.9
3,843,219	+		MIT1002_03438	0.15	-3.0
3,843,226	+		MIT1002_03438	0.15	-0.4
3,843,271	+		MIT1002_03438	0.17	-1.8
3,843,281	-		MIT1002_03438	0.18	+1.2
3,843,363	-		MIT1002_03438	0.21	-0.3
3,843,375	+		MIT1002_03438	0.22	-0.6
3,843,419	+		MIT1002_03438	0.24	-0.1
3,843,431	+		MIT1002_03438	0.24	+0.9
3,843,439	-		MIT1002_03438	0.24	+0.7
3,843,439	-		MIT1002_03438	0.24	-1.7
3,843,464	-		MIT1002_03438	0.26	-0.6
3,843,518	-		MIT1002_03438	0.28	+0.9
3,843,541	-		MIT1002_03438	0.29	-0.1
3,843,541	-		MIT1002_03438	0.29	-0.8
3,843,576	-		MIT1002_03438	0.30	-0.0
3,843,591	+		MIT1002_03438	0.31	-0.0
3,843,591	+		MIT1002_03438	0.31	-1.1
3,843,608	+		MIT1002_03438	0.32	+0.8
3,843,636	+		MIT1002_03438	0.33	-0.5
3,843,734	+		MIT1002_03438	0.37	-0.7
3,843,831	+		MIT1002_03438	0.42	+0.7
3,843,839	-		MIT1002_03438	0.42	+1.9
3,843,877	-		MIT1002_03438	0.44	+0.6