Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03406

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
3,810,069	-				+1.5
3,810,118	-				-1.0
3,810,613	-		MIT1002_03405	0.10	-2.1
3,810,673	+		MIT1002_03405	0.34	-0.3
3,810,681	-		MIT1002_03405	0.37	+1.0
3,810,699	+		MIT1002_03405	0.44	-1.0
3,810,708	+		MIT1002_03405	0.47	-0.5
3,810,708	+		MIT1002_03405	0.47	-0.9
3,810,708	+		MIT1002_03405	0.47	-0.4
3,810,708	+		MIT1002_03405	0.47	+1.7
3,810,708	+		MIT1002_03405	0.47	-1.0
3,810,716	-		MIT1002_03405	0.50	-1.2
3,810,716	-		MIT1002_03405	0.50	-0.6
3,810,716	-		MIT1002_03405	0.50	-0.9
3,810,716	-		MIT1002_03405	0.50	-1.3
3,810,716	-		MIT1002_03405	0.50	-0.9
3,810,716	-		MIT1002_03405	0.50	+1.3
3,810,818	-				+1.0
3,810,819	-				+0.6
3,810,918	-				-0.2
3,810,988	-				+1.4
3,810,995	+				+0.1
3,810,998	-				+0.0
3,811,019	+				-0.2
3,811,024	+				-0.8
3,811,026	+				+0.7
3,811,026	+				-0.5
3,811,026	+				-1.2
3,811,034	-				-0.2
3,811,034	-				+1.6
3,811,036	+				-1.2
3,811,036	+				-0.5
3,811,036	+				+1.4
3,811,037	+				-0.9
3,811,037	+				-1.2
3,811,037	+				-1.7
3,811,038	+				+0.1
3,811,044	-				-0.1
3,811,044	-				-0.5
3,811,045	-				-1.0
3,811,045	-				+0.1
3,811,045	-				-0.2
3,811,045	-				+0.3
3,811,053	-				-0.6
3,811,085	-		MIT1002_03406	0.19	+0.7
3,811,097	+		MIT1002_03406	0.23	-2.2
3,811,160	+		MIT1002_03406	0.43	+0.7
3,811,168	-		MIT1002_03406	0.46	-2.0
3,811,216	-		MIT1002_03406	0.61	+0.2
3,811,218	+		MIT1002_03406	0.62	-0.8
3,811,226	-		MIT1002_03406	0.64	-0.5
3,811,238	-		MIT1002_03406	0.68	+0.0
3,811,266	+		MIT1002_03406	0.77	+0.7
3,811,273	-		MIT1002_03406	0.80	+0.3
3,811,273	-		MIT1002_03406	0.80	+3.2
3,811,296	+		MIT1002_03406	0.87	-0.0
3,811,304	-		MIT1002_03406	0.90	+1.4
3,811,306	-				+0.3
3,811,356	+				-1.9
3,811,359	-				-0.3
3,811,361	+				-1.1
3,811,387	-				+0.1
3,811,413	-				-1.3
3,811,434	-				-1.3
3,811,520	+				-0.3
3,811,528	-				+0.2
3,811,532	-				+0.3
3,811,538	-				-1.5
3,811,600	+				+0.4
3,811,608	-				-0.7
3,811,797	-		MIT1002_03407	0.15	+0.5
3,811,799	+		MIT1002_03407	0.16	+0.4
3,811,799	+		MIT1002_03407	0.16	+0.0
3,811,807	-		MIT1002_03407	0.20	-1.1
3,811,807	-		MIT1002_03407	0.20	+0.2
3,811,834	+		MIT1002_03407	0.31	-0.0
3,811,849	+		MIT1002_03407	0.38	+0.7
3,811,863	-		MIT1002_03407	0.44	-0.4
3,811,892	+		MIT1002_03407	0.56	-0.3
3,811,930	+		MIT1002_03407	0.72	-1.3
3,811,933	-		MIT1002_03407	0.74	+1.9
3,811,954	+		MIT1002_03407	0.82	-0.4
3,811,962	-		MIT1002_03407	0.86	+2.5
3,811,975	-				-0.2
3,812,155	+		MIT1002_03408	0.68	-0.5
3,812,262	+		MIT1002_03409	0.12	+1.2
3,812,303	+		MIT1002_03409	0.27	+0.3
3,812,316	+		MIT1002_03409	0.32	+0.3
3,812,333	-		MIT1002_03409	0.38	+3.0