Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03311

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
3,694,319	+		MIT1002_03309	0.40	+2.8
3,694,320	+		MIT1002_03309	0.40	+2.5
3,694,327	+		MIT1002_03309	0.41	-0.8
3,694,373	+		MIT1002_03309	0.46	-0.8
3,694,375	+		MIT1002_03309	0.47	+0.3
3,694,383	-		MIT1002_03309	0.48	-0.2
3,694,404	+		MIT1002_03309	0.50	-1.8
3,694,484	-		MIT1002_03309	0.60	+1.1
3,694,676	+		MIT1002_03309	0.85	-0.9
3,694,676	+		MIT1002_03309	0.85	-0.8
3,694,676	+		MIT1002_03309	0.85	-0.3
3,694,684	-		MIT1002_03309	0.86	-2.3
3,694,684	-		MIT1002_03309	0.86	-1.2
3,694,684	-		MIT1002_03309	0.86	-1.2
3,694,696	+		MIT1002_03309	0.87	+0.3
3,694,702	+		MIT1002_03309	0.88	-0.6
3,694,704	-		MIT1002_03309	0.88	-1.0
3,694,725	+				+1.5
3,694,764	+				-0.2
3,694,777	+				+1.2
3,694,777	+				+0.3
3,694,798	-				-0.7
3,694,800	+				+0.7
3,694,800	+				-0.5
3,694,808	-				+0.9
3,694,808	-				-0.2
3,694,820	-				-0.3
3,694,829	-				-0.7
3,694,878	-				-0.6
3,694,964	-		MIT1002_03310	0.17	+0.8
3,695,061	-		MIT1002_03310	0.48	-1.9
3,695,080	+		MIT1002_03310	0.54	+0.7
3,695,088	-		MIT1002_03310	0.56	-0.2
3,695,088	-		MIT1002_03310	0.56	+0.2
3,695,146	+		MIT1002_03310	0.75	+1.0
3,695,180	+		MIT1002_03310	0.85	+0.2
3,695,258	+				-0.2
3,695,273	+				-0.5
3,695,312	-				-0.3
3,695,320	+				-1.8
3,695,320	+				-0.8
3,695,328	-		MIT1002_03311	0.12	-0.3
3,695,351	+		MIT1002_03311	0.27	-0.4
3,695,359	-		MIT1002_03311	0.33	+1.4
3,695,359	-		MIT1002_03311	0.33	+1.7
3,695,415	-		MIT1002_03311	0.71	+0.7
3,695,460	-				+0.8
3,695,667	+				+0.0
3,695,669	+				+1.9
3,695,675	-				+0.1
3,695,713	+		MIT1002_03312	0.13	+0.6
3,695,811	+		MIT1002_03312	0.24	-1.0
3,695,813	+		MIT1002_03312	0.24	-0.6
3,695,830	+		MIT1002_03312	0.26	-0.5
3,695,956	+		MIT1002_03312	0.40	+0.9
3,695,968	+		MIT1002_03312	0.42	-2.1
3,696,072	-		MIT1002_03312	0.53	+0.5
3,696,149	+		MIT1002_03312	0.62	+0.4
3,696,181	+		MIT1002_03312	0.65	-0.5
3,696,182	+		MIT1002_03312	0.65	-1.7
3,696,190	-		MIT1002_03312	0.66	+0.2
3,696,264	+		MIT1002_03312	0.74	-0.9
3,696,272	-		MIT1002_03312	0.75	-1.2