Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03303

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
3,684,355	+				-0.4
3,684,355	+				+1.4
3,684,374	-				+0.4
3,684,421	+		MIT1002_03302	0.11	+2.1
3,684,421	+		MIT1002_03302	0.11	+0.4
3,684,423	+		MIT1002_03302	0.11	+0.5
3,684,423	+		MIT1002_03302	0.11	+0.6
3,684,423	+		MIT1002_03302	0.11	-1.3
3,684,423	+		MIT1002_03302	0.11	-1.7
3,684,429	-		MIT1002_03302	0.12	+0.4
3,684,431	-		MIT1002_03302	0.12	-0.5
3,684,431	-		MIT1002_03302	0.12	-0.5
3,684,647	-		MIT1002_03302	0.35	-0.2
3,684,712	-		MIT1002_03302	0.42	-1.0
3,684,748	+		MIT1002_03302	0.46	-1.2
3,684,766	-		MIT1002_03302	0.48	-0.5
3,684,791	+		MIT1002_03302	0.50	+0.9
3,684,797	+		MIT1002_03302	0.51	-0.0
3,684,799	-		MIT1002_03302	0.51	-0.3
3,684,807	+		MIT1002_03302	0.52	-1.3
3,684,858	+		MIT1002_03302	0.58	-1.7
3,684,858	+		MIT1002_03302	0.58	+0.2
3,684,860	-		MIT1002_03302	0.58	+0.9
3,684,860	-		MIT1002_03302	0.58	-1.0
3,684,867	-		MIT1002_03302	0.58	-0.9
3,684,887	+		MIT1002_03302	0.61	+0.3
3,684,897	+		MIT1002_03302	0.62	+2.6
3,684,931	+		MIT1002_03302	0.65	-0.1
3,685,162	+		MIT1002_03302	0.90	-0.1
3,685,168	+				-1.2
3,685,183	-				+0.5
3,685,208	+				-0.4
3,685,208	+				+0.9
3,685,208	+				+0.9
3,685,208	+				+1.1
3,685,214	-				+1.0
3,685,223	+				+0.3
3,685,231	-				+1.1
3,685,355	+				+0.0
3,685,444	-		MIT1002_03303	0.18	+0.8
3,685,472	-		MIT1002_03303	0.22	-0.7
3,685,474	+		MIT1002_03303	0.22	+0.4
3,685,474	+		MIT1002_03303	0.22	+0.7
3,685,482	-		MIT1002_03303	0.23	-2.8
3,685,513	+		MIT1002_03303	0.27	-1.3
3,685,513	+		MIT1002_03303	0.27	-1.6
3,685,521	-		MIT1002_03303	0.28	+1.8
3,685,528	-		MIT1002_03303	0.29	-0.2
3,685,528	-		MIT1002_03303	0.29	-0.4
3,685,544	-		MIT1002_03303	0.31	+1.1
3,685,601	+		MIT1002_03303	0.39	+0.8
3,685,601	+		MIT1002_03303	0.39	-0.5
3,685,609	-		MIT1002_03303	0.40	+1.9
3,685,674	+		MIT1002_03303	0.48	+1.0
3,685,677	-		MIT1002_03303	0.48	-1.4
3,685,691	+		MIT1002_03303	0.50	-2.0
3,685,693	+		MIT1002_03303	0.50	-1.9
3,685,710	+		MIT1002_03303	0.53	-0.7
3,685,720	+		MIT1002_03303	0.54	-0.4
3,685,728	-		MIT1002_03303	0.55	-1.9
3,685,806	-		MIT1002_03303	0.65	-1.2
3,685,813	-		MIT1002_03303	0.66	+1.0
3,685,848	+		MIT1002_03303	0.70	+0.7
3,685,855	+		MIT1002_03303	0.71	-0.7
3,685,856	-		MIT1002_03303	0.71	-0.7
3,685,863	+		MIT1002_03303	0.72	-0.5
3,685,989	+		MIT1002_03303	0.89	+0.2
3,685,990	+		MIT1002_03303	0.89	+1.4
3,685,997	-		MIT1002_03303	0.90	+0.1
3,686,097	+				+0.7
3,686,097	+				+0.3
3,686,174	+				+0.0
3,686,174	-				+1.7
3,686,198	-				-1.2
3,686,268	-		MIT1002_03304	0.18	-0.1
3,686,333	+		MIT1002_03304	0.26	-0.7
3,686,353	+		MIT1002_03304	0.29	-1.0
3,686,363	+		MIT1002_03304	0.30	-2.2
3,686,371	-		MIT1002_03304	0.31	-0.6
3,686,371	-		MIT1002_03304	0.31	-0.6
3,686,432	+		MIT1002_03304	0.39	+2.3
3,686,444	+		MIT1002_03304	0.41	-0.8
3,686,642	+		MIT1002_03304	0.67	-1.8
3,686,650	-		MIT1002_03304	0.68	-2.3
3,686,691	+		MIT1002_03304	0.73	+0.2
3,686,691	+		MIT1002_03304	0.73	+1.7
3,686,699	-		MIT1002_03304	0.74	-1.5
3,686,816	+		MIT1002_03304	0.90	-1.2
3,686,856	-				-0.9
3,686,856	-				-0.2
3,686,856	-				-0.5
3,686,994	-				-1.5
3,686,999	-				+0.3
3,687,004	-				-1.6
3,687,045	+				-1.0