Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03130

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
3,482,468	-		MIT1002_03129	0.20	-1.6
3,482,500	-		MIT1002_03129	0.24	-2.0
3,482,545	-		MIT1002_03129	0.29	-3.5
3,482,555	-		MIT1002_03129	0.30	-0.8
3,482,555	-		MIT1002_03129	0.30	-1.7
3,482,559	+		MIT1002_03129	0.30	+1.2
3,482,567	-		MIT1002_03129	0.31	-1.6
3,482,654	+		MIT1002_03129	0.41	+1.9
3,482,699	+		MIT1002_03129	0.46	+1.3
3,482,725	-		MIT1002_03129	0.49	+1.5
3,482,775	+		MIT1002_03129	0.55	+0.8
3,482,783	-		MIT1002_03129	0.56	+0.9
3,482,783	-		MIT1002_03129	0.56	+2.2
3,482,783	-		MIT1002_03129	0.56	-1.8
3,482,787	+		MIT1002_03129	0.57	-1.5
3,482,812	-		MIT1002_03129	0.59	-1.6
3,482,869	-		MIT1002_03129	0.66	-2.6
3,482,901	-		MIT1002_03129	0.70	+0.1
3,482,916	-		MIT1002_03129	0.71	-2.4
3,482,984	-		MIT1002_03129	0.79	-2.3
3,483,042	+		MIT1002_03129	0.86	-1.0
3,483,156	+				+2.9
3,483,217	-				+0.5
3,483,225	+				-2.1
3,483,254	-				-2.9
3,483,294	+				-1.0
3,483,302	-				-2.2
3,483,302	-				+0.7
3,483,302	-				-2.7
3,483,306	+				+0.9
3,483,306	+				-0.3
3,483,306	+				-1.1
3,483,314	+				+0.0
3,483,322	-				-1.5
3,483,340	+				-0.6
3,483,353	-				-0.6
3,483,443	-				-1.6
3,483,554	-		MIT1002_03130	0.11	-2.3
3,483,585	-		MIT1002_03130	0.14	-2.2
3,483,593	+		MIT1002_03130	0.15	-1.9
3,483,615	-		MIT1002_03130	0.17	-2.5
3,483,616	-		MIT1002_03130	0.17	-1.6
3,483,738	-		MIT1002_03130	0.28	-1.9
3,483,738	-		MIT1002_03130	0.28	-3.4
3,483,738	-		MIT1002_03130	0.28	-0.8
3,483,738	-		MIT1002_03130	0.28	-1.6
3,483,944	+		MIT1002_03130	0.46	-3.7
3,484,001	-		MIT1002_03130	0.51	-0.9
3,484,011	-		MIT1002_03130	0.52	+0.5
3,484,122	+		MIT1002_03130	0.62	-1.4
3,484,122	+		MIT1002_03130	0.62	-1.0
3,484,129	+		MIT1002_03130	0.62	-3.1
3,484,130	-		MIT1002_03130	0.63	-1.3
3,484,160	+		MIT1002_03130	0.65	-1.0
3,484,224	-		MIT1002_03130	0.71	-3.1
3,484,286	+		MIT1002_03130	0.76	-0.8
3,484,286	+		MIT1002_03130	0.76	-0.2
3,484,286	+		MIT1002_03130	0.76	-0.5
3,484,294	-		MIT1002_03130	0.77	-1.4
3,484,398	-		MIT1002_03130	0.86	-1.5
3,484,425	-		MIT1002_03130	0.89	-0.6
3,484,432	-		MIT1002_03130	0.89	-1.2
3,484,443	+				-3.5
3,484,461	-				-0.8
3,484,461	-				-1.6
3,484,475	-				-3.2
3,484,532	-				-3.6