Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02625

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
2,921,597	+		MIT1002_02624	0.17	+0.4
2,921,702	-		MIT1002_02624	0.28	+0.2
2,921,726	+		MIT1002_02624	0.31	+0.3
2,921,734	-		MIT1002_02624	0.32	-0.3
2,921,936	+		MIT1002_02624	0.54	+1.2
2,921,937	-		MIT1002_02624	0.54	+0.8
2,922,000	+		MIT1002_02624	0.61	-0.1
2,922,000	+		MIT1002_02624	0.61	+1.4
2,922,008	-		MIT1002_02624	0.62	+1.2
2,922,012	+		MIT1002_02624	0.62	+1.1
2,922,012	+		MIT1002_02624	0.62	+0.5
2,922,012	+		MIT1002_02624	0.62	+0.1
2,922,012	+		MIT1002_02624	0.62	+0.4
2,922,020	-		MIT1002_02624	0.63	+1.0
2,922,020	-		MIT1002_02624	0.63	-0.8
2,922,020	-		MIT1002_02624	0.63	-0.9
2,922,020	-		MIT1002_02624	0.63	-1.2
2,922,020	-		MIT1002_02624	0.63	-0.7
2,922,020	-		MIT1002_02624	0.63	+2.3
2,922,072	-		MIT1002_02624	0.69	+1.9
2,922,119	+		MIT1002_02624	0.74	+0.1
2,922,262	-		MIT1002_02624	0.90	+1.6
2,922,262	-		MIT1002_02624	0.90	-1.3
2,922,309	+				-1.1
2,922,425	-				-1.2
2,922,518	+				+2.1
2,922,523	+				-0.6
2,922,571	-		MIT1002_02625	0.13	-0.3
2,922,683	-		MIT1002_02625	0.36	+1.0
2,922,744	+		MIT1002_02625	0.49	-0.7
2,922,751	-		MIT1002_02625	0.51	-3.3
2,922,827	-		MIT1002_02625	0.66	+0.2
2,922,878	-		MIT1002_02625	0.77	+0.2
2,922,887	-		MIT1002_02625	0.79	+0.1
2,923,032	-				+0.3
2,923,120	+				-0.2
2,923,120	+				-0.3
2,923,120	+				+0.2
2,923,128	-				+3.1
2,923,157	-		MIT1002_02626	0.11	+0.3
2,923,200	+		MIT1002_02626	0.28	-0.2
2,923,205	+		MIT1002_02626	0.30	+0.5
2,923,242	+		MIT1002_02626	0.46	-0.6
2,923,251	+		MIT1002_02626	0.49	-0.2
2,923,259	-		MIT1002_02626	0.52	+0.6
2,923,279	-		MIT1002_02626	0.61	+2.4
2,923,347	+		MIT1002_02626	0.88	+0.6
2,923,355	-				+0.5
2,923,357	-				-0.5
2,923,460	-				-0.1
2,923,496	-				+0.7
2,923,522	-				+0.4
2,923,694	-		MIT1002_02627	0.24	-0.8
2,923,802	+		MIT1002_02627	0.43	+0.4
2,923,804	+		MIT1002_02627	0.43	-1.2
2,923,819	+		MIT1002_02627	0.46	-1.2
2,923,849	+		MIT1002_02627	0.51	-1.3