Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02244

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
2,504,674	-		MIT1002_02242	0.41	-0.5
2,504,738	-		MIT1002_02242	0.56	-0.1
2,504,767	-		MIT1002_02242	0.63	-2.3
2,504,780	+		MIT1002_02242	0.66	-0.2
2,504,783	-		MIT1002_02242	0.67	-0.3
2,504,800	+		MIT1002_02242	0.71	-2.4
2,504,817	+		MIT1002_02242	0.75	-0.2
2,504,830	-		MIT1002_02242	0.78	-2.4
2,504,835	+		MIT1002_02242	0.79	+0.1
2,504,843	-		MIT1002_02242	0.81	+1.6
2,504,843	-		MIT1002_02242	0.81	+0.3
2,504,843	-		MIT1002_02242	0.81	+0.9
2,504,867	+		MIT1002_02242	0.87	+0.9
2,504,874	-		MIT1002_02242	0.89	+0.2
2,504,915	+				-0.7
2,504,945	-				-1.3
2,504,948	-				-0.8
2,504,948	-				-2.1
2,505,087	+		MIT1002_02243	0.10	+0.1
2,505,143	-		MIT1002_02243	0.36	-0.1
2,505,200	-		MIT1002_02243	0.61	+0.3
2,505,200	-		MIT1002_02243	0.61	+1.9
2,505,229	+		MIT1002_02243	0.74	+0.1
2,505,287	-				+0.9
2,505,287	-				-0.2
2,505,298	+				-0.1
2,505,324	+				+0.3
2,505,332	-				-1.0
2,505,366	+				+0.1
2,505,366	+				-0.3
2,505,374	-				-0.0
2,505,516	-		MIT1002_02244	0.22	+1.2
2,505,562	-		MIT1002_02244	0.43	+1.4
2,505,603	-		MIT1002_02244	0.62	-0.3
2,505,791	+		MIT1002_02245	0.34	-0.2
2,505,822	-		MIT1002_02245	0.45	+0.6
2,505,865	-		MIT1002_02245	0.59	-0.4
2,505,869	+		MIT1002_02245	0.61	-0.3
2,505,877	-		MIT1002_02245	0.63	+0.8
2,506,035	-				+1.4
2,506,037	+				-0.7
2,506,059	-				-1.8
2,506,060	-				-0.7
2,506,074	-				+2.1
2,506,165	+				+0.9
2,506,258	+		MIT1002_02246	0.77	-0.3
2,506,263	-		MIT1002_02246	0.82	-1.1
2,506,277	+				-1.9
2,506,277	+				+0.8
2,506,277	+				-1.5
2,506,277	+				-1.4
2,506,285	-				+0.4
2,506,285	-				+1.8
2,506,285	-				-0.1
2,506,285	-				+1.8
2,506,285	-				-0.6
2,506,285	-				-0.4
2,506,285	-				+1.7
2,506,285	-				+1.0
2,506,287	+				-2.4
2,506,295	-				-1.9
2,506,295	-				-0.7
2,506,368	+		MIT1002_02247	0.43	-0.1
2,506,381	-		MIT1002_02247	0.50	-0.6
2,506,444	-		MIT1002_02247	0.86	+1.5
2,506,462	-				-0.2
2,506,486	+				+2.0
2,506,493	+				+1.0
2,506,504	+				-0.6
2,506,512	-				+0.4
2,506,522	-				+0.4
2,506,537	+				-1.3
2,506,562	-				+1.2
2,506,680	-		MIT1002_02248	0.35	-0.5