Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02241

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
2,503,971	-				-0.5
2,503,973	-				+1.2
2,504,011	+				-0.5
2,504,079	+				+0.8
2,504,152	+		MIT1002_02241	0.30	-0.5
2,504,173	-		MIT1002_02241	0.37	-0.1
2,504,188	+		MIT1002_02241	0.42	+0.3
2,504,196	-		MIT1002_02241	0.45	-1.3
2,504,196	-		MIT1002_02241	0.45	-1.3
2,504,243	-		MIT1002_02241	0.60	-0.5
2,504,243	-		MIT1002_02241	0.60	-2.8
2,504,246	+		MIT1002_02241	0.61	+0.3
2,504,306	+		MIT1002_02241	0.81	-0.3
2,504,342	-				-0.4
2,504,358	-				-0.3
2,504,377	-				-0.5
2,504,401	-				-0.1
2,504,405	+				-0.1
2,504,405	+				+0.7
2,504,413	-				-1.1
2,504,415	+				-0.5
2,504,423	-				-0.3
2,504,452	+				-2.4
2,504,452	+				-1.5
2,504,452	+				+0.3
2,504,452	+				+0.7
2,504,459	+				-0.2
2,504,460	-				-1.5
2,504,460	-				+0.4
2,504,460	-				+0.1
2,504,460	-				-0.1
2,504,460	-				-0.8
2,504,674	-		MIT1002_02242	0.41	-0.5
2,504,738	-		MIT1002_02242	0.56	-0.1
2,504,767	-		MIT1002_02242	0.63	-2.3
2,504,780	+		MIT1002_02242	0.66	-0.2
2,504,783	-		MIT1002_02242	0.67	-0.3
2,504,800	+		MIT1002_02242	0.71	-2.4
2,504,817	+		MIT1002_02242	0.75	-0.2
2,504,830	-		MIT1002_02242	0.78	-2.4
2,504,835	+		MIT1002_02242	0.79	+0.1
2,504,843	-		MIT1002_02242	0.81	+1.6
2,504,843	-		MIT1002_02242	0.81	+0.3
2,504,843	-		MIT1002_02242	0.81	+0.9
2,504,867	+		MIT1002_02242	0.87	+0.9
2,504,874	-		MIT1002_02242	0.89	+0.2
2,504,915	+				-0.7
2,504,945	-				-1.3
2,504,948	-				-0.8
2,504,948	-				-2.1
2,505,087	+		MIT1002_02243	0.10	+0.1
2,505,143	-		MIT1002_02243	0.36	-0.1
2,505,200	-		MIT1002_02243	0.61	+0.3
2,505,200	-		MIT1002_02243	0.61	+1.9
2,505,229	+		MIT1002_02243	0.74	+0.1
2,505,287	-				+0.9
2,505,287	-				-0.2
2,505,298	+				-0.1
2,505,324	+				+0.3
2,505,332	-				-1.0