Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02172

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
2,425,174	+				-2.4
2,425,249	-				-0.2
2,425,270	-				+0.9
2,425,289	-				+0.9
2,425,384	+				-0.9
2,425,418	+				-0.0
2,425,424	-				-0.8
2,425,424	-				-0.2
2,425,424	-				+0.0
2,425,464	+		MIT1002_02172	0.10	+1.0
2,425,471	+		MIT1002_02172	0.12	-0.7
2,425,471	+		MIT1002_02172	0.12	-0.4
2,425,479	-		MIT1002_02172	0.13	+1.2
2,425,479	-		MIT1002_02172	0.13	-0.4
2,425,488	+		MIT1002_02172	0.16	+1.2
2,425,562	-		MIT1002_02172	0.32	-1.5
2,425,587	-		MIT1002_02172	0.38	+0.4
2,425,614	-		MIT1002_02172	0.44	-1.2
2,425,692	+		MIT1002_02172	0.62	-2.1
2,425,741	-		MIT1002_02172	0.73	-1.0
2,425,741	-		MIT1002_02172	0.73	+0.0
2,425,786	-		MIT1002_02172	0.84	+0.3
2,425,791	-		MIT1002_02172	0.85	+0.8
2,425,958	-				-2.2
2,425,959	+				-0.1
2,425,959	+				+0.0
2,425,995	+				-0.3
2,426,011	+		MIT1002_02173	0.11	-0.6
2,426,165	+		MIT1002_02173	0.32	-0.4
2,426,165	+		MIT1002_02173	0.32	+0.8
2,426,188	-		MIT1002_02173	0.36	+1.1
2,426,201	-		MIT1002_02173	0.37	-0.5
2,426,219	+		MIT1002_02173	0.40	-1.6
2,426,273	+		MIT1002_02173	0.47	-0.9
2,426,364	-		MIT1002_02173	0.60	+0.4
2,426,404	+		MIT1002_02173	0.66	+0.4
2,426,404	+		MIT1002_02173	0.66	-0.2
2,426,404	+		MIT1002_02173	0.66	-2.0
2,426,404	+		MIT1002_02173	0.66	-0.9
2,426,404	+		MIT1002_02173	0.66	-2.1
2,426,404	+		MIT1002_02173	0.66	-1.2
2,426,404	+		MIT1002_02173	0.66	+0.5
2,426,404	+		MIT1002_02173	0.66	-0.1
2,426,404	+		MIT1002_02173	0.66	-0.6
2,426,411	+		MIT1002_02173	0.67	+0.9
2,426,412	-		MIT1002_02173	0.67	+0.9
2,426,412	-		MIT1002_02173	0.67	+2.2
2,426,569	-		MIT1002_02173	0.89	-1.2
2,426,583	-				-0.3
2,426,583	-				-1.4
2,426,583	-				-1.7
2,426,589	+				-0.5
2,426,597	-				+1.0
2,426,608	+				+0.6
2,426,616	-				+0.7
2,426,630	-				-0.5
2,426,632	+				-0.2
2,426,656	+				+0.2
2,426,683	-				+0.6
2,426,780	-				-2.1