Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02107

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
2,365,001	+		MIT1002_02105	0.84	+1.8
2,365,001	+		MIT1002_02105	0.84	+0.4
2,365,001	+		MIT1002_02105	0.84	+1.6
2,365,001	+		MIT1002_02105	0.84	+0.7
2,365,001	+		MIT1002_02105	0.84	-0.8
2,365,001	+		MIT1002_02105	0.84	-1.1
2,365,001	+		MIT1002_02105	0.84	+1.3
2,365,001	+		MIT1002_02105	0.84	+1.3
2,365,009	-		MIT1002_02105	0.88	+0.1
2,365,009	-		MIT1002_02105	0.88	+0.2
2,365,009	-		MIT1002_02105	0.88	-1.6
2,365,011	-		MIT1002_02105	0.88	-0.5
2,365,019	+				+2.8
2,365,022	-				-1.1
2,365,022	-				+0.4
2,365,024	+				-2.4
2,365,027	-				+0.3
2,365,027	-				+0.7
2,365,027	-				-0.7
2,365,034	-				+0.3
2,365,041	+				+0.5
2,365,049	+				-1.0
2,365,057	-				-0.9
2,365,170	+				+0.0
2,365,259	+				-0.7
2,365,259	+				+1.6
2,365,259	+				+0.0
2,365,267	-				-1.1
2,365,267	-				+0.3
2,365,372	+				+1.7
2,365,372	+				-0.2
2,365,380	-				+0.2
2,365,394	-				+0.2
2,365,394	-				-0.4
2,365,458	-		MIT1002_02106	0.14	+0.1
2,365,522	+		MIT1002_02106	0.26	+2.2
2,365,523	+		MIT1002_02106	0.27	+1.2
2,365,523	+		MIT1002_02106	0.27	+0.9
2,365,523	+		MIT1002_02106	0.27	+1.2
2,365,523	+		MIT1002_02106	0.27	+0.3
2,365,531	-		MIT1002_02106	0.28	-0.3
2,365,578	-		MIT1002_02106	0.38	-2.8
2,365,583	-		MIT1002_02106	0.38	+0.9
2,365,628	+		MIT1002_02106	0.47	+0.1
2,365,683	-		MIT1002_02106	0.58	+1.2
2,365,685	+		MIT1002_02106	0.59	-0.8
2,365,693	-		MIT1002_02106	0.60	-1.4
2,365,697	+		MIT1002_02106	0.61	-2.4
2,365,749	-		MIT1002_02106	0.71	-1.1
2,365,758	+		MIT1002_02106	0.73	+0.4
2,365,763	+		MIT1002_02106	0.74	+0.4
2,365,868	+				-1.0
2,365,869	+				+1.1
2,365,876	-				-0.7
2,365,909	+				-2.7
2,365,944	+				+0.0
2,365,944	+				-0.1
2,366,059	+		MIT1002_02107	0.11	-0.6
2,366,059	+		MIT1002_02107	0.11	-0.4
2,366,150	+		MIT1002_02107	0.16	-0.4
2,366,376	-		MIT1002_02107	0.29	+1.8
2,366,478	+		MIT1002_02107	0.35	-2.2
2,366,524	-		MIT1002_02107	0.37	-2.1
2,366,531	-		MIT1002_02107	0.38	-1.4
2,366,546	-		MIT1002_02107	0.38	-0.1
2,366,557	+		MIT1002_02107	0.39	-0.3
2,366,565	-		MIT1002_02107	0.40	-0.2
2,366,565	-		MIT1002_02107	0.40	+0.7
2,366,580	-		MIT1002_02107	0.40	+0.1
2,366,590	+		MIT1002_02107	0.41	-0.3
2,366,655	+		MIT1002_02107	0.45	-0.6
2,366,775	-		MIT1002_02107	0.52	-0.3
2,366,930	+		MIT1002_02107	0.60	+0.6
2,366,995	-		MIT1002_02107	0.64	-1.6
2,367,035	+		MIT1002_02107	0.66	-0.4
2,367,081	+		MIT1002_02107	0.69	+0.1
2,367,101	+		MIT1002_02107	0.70	+0.0
2,367,101	-		MIT1002_02107	0.70	+1.1
2,367,106	+		MIT1002_02107	0.70	-1.3
2,367,124	-		MIT1002_02107	0.71	-0.9
2,367,158	+		MIT1002_02107	0.73	+0.6
2,367,158	+		MIT1002_02107	0.73	+0.8
2,367,158	+		MIT1002_02107	0.73	+0.1
2,367,163	+		MIT1002_02107	0.74	+0.4
2,367,165	+		MIT1002_02107	0.74	-0.5
2,367,166	-		MIT1002_02107	0.74	+0.1
2,367,166	-		MIT1002_02107	0.74	-1.2
2,367,166	-		MIT1002_02107	0.74	-1.0
2,367,254	-		MIT1002_02107	0.79	-1.2
2,367,280	+		MIT1002_02107	0.80	-1.3
2,367,288	-		MIT1002_02107	0.81	-1.3
2,367,600	+				-0.6
2,367,770	-		MIT1002_02108	0.12	+1.7
2,367,813	+		MIT1002_02108	0.16	-0.7
2,367,813	+		MIT1002_02108	0.16	+0.4
2,367,833	+		MIT1002_02108	0.18	+0.9
2,367,964	+		MIT1002_02108	0.29	+1.3
2,368,029	+		MIT1002_02108	0.34	+0.3
2,368,046	-		MIT1002_02108	0.36	-1.7
2,368,202	+		MIT1002_02108	0.49	-0.1
2,368,210	-		MIT1002_02108	0.50	+0.4
2,368,240	+		MIT1002_02108	0.52	+2.7
2,368,298	-		MIT1002_02108	0.57	-1.7
2,368,319	-		MIT1002_02108	0.59	-1.9
2,368,324	-		MIT1002_02108	0.60	-2.7
2,368,338	+		MIT1002_02108	0.61	-0.1
2,368,367	-		MIT1002_02108	0.63	-1.0
2,368,598	+		MIT1002_02108	0.83	-1.2
2,368,603	+		MIT1002_02108	0.83	+2.5
2,368,603	+		MIT1002_02108	0.83	+0.4
2,368,606	-		MIT1002_02108	0.84	+1.9
2,368,613	+		MIT1002_02108	0.84	-0.9
2,368,613	+		MIT1002_02108	0.84	-2.0
2,368,621	-		MIT1002_02108	0.85	-1.9
2,368,623	+		MIT1002_02108	0.85	+1.7
2,368,625	+		MIT1002_02108	0.85	-1.7