Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01798

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
2,000,491	+				-0.3
2,000,565	+		MIT1002_01797	0.18	+1.9
2,000,614	-		MIT1002_01797	0.24	-2.0
2,000,625	+		MIT1002_01797	0.26	+1.1
2,000,666	-		MIT1002_01797	0.30	-0.8
2,000,805	+		MIT1002_01797	0.47	-0.9
2,000,815	+		MIT1002_01797	0.48	-1.8
2,000,815	+		MIT1002_01797	0.48	-1.1
2,000,823	-		MIT1002_01797	0.49	-0.7
2,000,823	-		MIT1002_01797	0.49	+1.3
2,000,870	+		MIT1002_01797	0.55	-0.4
2,000,872	+		MIT1002_01797	0.55	+0.2
2,001,006	-		MIT1002_01797	0.71	-0.7
2,001,030	+		MIT1002_01797	0.74	+0.0
2,001,054	+		MIT1002_01797	0.77	+1.0
2,001,076	-		MIT1002_01797	0.80	-1.4
2,001,076	-		MIT1002_01797	0.80	-0.0
2,001,149	+		MIT1002_01797	0.89	-2.8
2,001,170	-				-1.2
2,001,204	-				-1.9
2,001,277	-				-0.4
2,001,358	+				-1.0
2,001,363	-				-0.1
2,001,366	-				-0.6
2,001,512	-				+0.1
2,001,542	+		MIT1002_01798	0.11	-0.7
2,001,552	-		MIT1002_01798	0.12	+0.1
2,001,560	-		MIT1002_01798	0.13	+1.2
2,001,644	+		MIT1002_01798	0.22	-0.1
2,001,652	+		MIT1002_01798	0.23	-0.3
2,001,652	-		MIT1002_01798	0.23	-0.2
2,001,660	-		MIT1002_01798	0.24	+2.0
2,001,660	-		MIT1002_01798	0.24	-2.2
2,001,660	-		MIT1002_01798	0.24	-1.5
2,001,684	-		MIT1002_01798	0.26	+2.1
2,001,689	+		MIT1002_01798	0.27	+0.5
2,001,737	+		MIT1002_01798	0.32	+0.7
2,001,799	+		MIT1002_01798	0.38	+0.7
2,001,799	+		MIT1002_01798	0.38	+0.2
2,001,807	-		MIT1002_01798	0.39	-2.0
2,001,822	-		MIT1002_01798	0.41	+0.4
2,001,827	-		MIT1002_01798	0.41	-0.0
2,001,835	-		MIT1002_01798	0.42	-0.3
2,001,840	+		MIT1002_01798	0.42	+1.6
2,001,849	-		MIT1002_01798	0.43	-1.0
2,001,855	-		MIT1002_01798	0.44	-0.2
2,001,901	+		MIT1002_01798	0.49	-1.2
2,001,901	+		MIT1002_01798	0.49	-0.4
2,001,901	+		MIT1002_01798	0.49	+1.0
2,001,909	-		MIT1002_01798	0.50	-0.2
2,001,968	+		MIT1002_01798	0.56	-0.6
2,001,968	+		MIT1002_01798	0.56	+1.9
2,001,976	-		MIT1002_01798	0.57	+0.8
2,001,985	+		MIT1002_01798	0.58	+2.4
2,001,995	+		MIT1002_01798	0.59	+0.1
2,001,998	-		MIT1002_01798	0.59	-0.3
2,002,047	-		MIT1002_01798	0.64	+0.9
2,002,170	-		MIT1002_01798	0.77	-0.5
2,002,187	-		MIT1002_01798	0.79	-0.4
2,002,364	+				-1.1
2,002,372	-				-0.1
2,002,485	-				-0.2
2,002,485	-				-0.6
2,002,486	-				-1.2
2,002,525	+				-0.4
2,002,533	-				+0.0
2,002,535	+				-0.1
2,002,535	+				+0.6
2,002,535	+				+1.6
2,002,535	+				-0.4
2,002,535	+				+0.7
2,002,535	+				+0.3
2,002,535	+				-0.2
2,002,535	+				-1.3
2,002,535	+				+0.0
2,002,535	+				-1.8
2,002,535	+				-0.2
2,002,540	+				+0.1
2,002,543	-				+0.7
2,002,543	-				-0.5
2,002,543	-				+0.8
2,002,543	-				-0.9
2,002,549	+				-1.9
2,002,550	+				-1.8
2,002,573	-				-0.9
2,002,689	+				-1.7
2,002,701	+				+1.0
2,002,704	-				+0.9
2,002,704	-				-0.3
2,002,704	-				-0.4
2,002,719	-				-0.0
2,002,719	-				-1.7
2,002,775	+		MIT1002_01799	0.11	-0.1
2,002,775	+		MIT1002_01799	0.11	-1.8
2,002,783	-		MIT1002_01799	0.12	+1.4
2,002,783	-		MIT1002_01799	0.12	+1.4
2,002,783	-		MIT1002_01799	0.12	+0.7
2,002,783	-		MIT1002_01799	0.12	-1.6
2,002,820	+		MIT1002_01799	0.15	+1.3
2,002,994	+		MIT1002_01799	0.29	+1.2
2,003,000	-		MIT1002_01799	0.30	-0.4
2,003,157	-		MIT1002_01799	0.42	+0.5
2,003,157	-		MIT1002_01799	0.42	-0.3
2,003,338	+		MIT1002_01799	0.57	+0.4
2,003,351	+		MIT1002_01799	0.58	-0.2