Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01535

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
1,686,779	+		MIT1002_01534	0.55	+0.9
1,686,838	+		MIT1002_01534	0.59	-0.5
1,686,929	-		MIT1002_01534	0.64	-1.2
1,686,932	+		MIT1002_01534	0.64	+0.1
1,686,970	+		MIT1002_01534	0.67	+0.6
1,687,007	-		MIT1002_01534	0.69	+0.1
1,687,116	+		MIT1002_01534	0.76	+0.7
1,687,188	-		MIT1002_01534	0.80	+2.2
1,687,325	+		MIT1002_01534	0.88	-0.6
1,687,325	+		MIT1002_01534	0.88	+0.8
1,687,718	+				-0.1
1,687,766	+				-1.5
1,687,767	-				-1.0
1,687,774	-				-0.3
1,687,813	+				-1.9
1,687,821	-				-0.4
1,687,821	-				+0.3
1,687,821	-				-1.4
1,687,874	-				+2.0
1,687,944	+				-0.1
1,687,968	-				-0.3
1,688,023	-		MIT1002_01535	0.12	-0.7
1,688,106	+		MIT1002_01535	0.15	-1.3
1,688,114	-		MIT1002_01535	0.15	-1.8
1,688,114	-		MIT1002_01535	0.15	-0.9
1,688,114	-		MIT1002_01535	0.15	+0.6
1,688,114	-		MIT1002_01535	0.15	-0.9
1,688,114	-		MIT1002_01535	0.15	-0.6
1,688,114	-		MIT1002_01535	0.15	-2.5
1,688,268	+		MIT1002_01535	0.21	+2.1
1,688,332	-		MIT1002_01535	0.24	+0.5
1,688,332	-		MIT1002_01535	0.24	-0.5
1,688,357	-		MIT1002_01535	0.25	+1.2
1,688,378	-		MIT1002_01535	0.26	+2.3
1,688,403	-		MIT1002_01535	0.27	+1.7
1,688,403	-		MIT1002_01535	0.27	-0.5
1,688,406	+		MIT1002_01535	0.27	-0.9
1,688,574	+		MIT1002_01535	0.34	-1.3
1,688,616	+		MIT1002_01535	0.35	-1.4
1,688,680	+		MIT1002_01535	0.38	-0.4
1,688,749	+		MIT1002_01535	0.41	-1.7
1,688,772	-		MIT1002_01535	0.42	-1.6
1,688,774	+		MIT1002_01535	0.42	-1.7
1,688,787	-		MIT1002_01535	0.42	+0.2
1,688,955	+		MIT1002_01535	0.49	+1.3
1,689,094	+		MIT1002_01535	0.55	-0.3
1,689,096	-		MIT1002_01535	0.55	-2.8
1,689,134	-		MIT1002_01535	0.56	-0.0
1,689,134	-		MIT1002_01535	0.56	-3.6
1,689,134	-		MIT1002_01535	0.56	-1.1
1,689,161	+		MIT1002_01535	0.57	+0.9
1,689,161	+		MIT1002_01535	0.57	+0.7
1,689,169	-		MIT1002_01535	0.58	-1.8
1,689,179	+		MIT1002_01535	0.58	+0.7
1,689,202	-		MIT1002_01535	0.59	-0.8
1,689,212	-		MIT1002_01535	0.59	-1.2
1,689,225	+		MIT1002_01535	0.60	-0.4
1,689,267	-		MIT1002_01535	0.62	-0.2
1,689,267	-		MIT1002_01535	0.62	+0.5
1,689,405	+		MIT1002_01535	0.67	-2.1
1,689,405	+		MIT1002_01535	0.67	-1.4
1,689,420	-		MIT1002_01535	0.68	-1.2
1,689,423	+		MIT1002_01535	0.68	-1.3
1,689,436	-		MIT1002_01535	0.69	-1.8
1,689,436	-		MIT1002_01535	0.69	-1.6
1,689,574	+		MIT1002_01535	0.74	-1.0
1,689,576	+		MIT1002_01535	0.74	+0.5
1,689,599	+		MIT1002_01535	0.75	+2.5
1,689,645	+		MIT1002_01535	0.77	-0.4
1,689,650	+		MIT1002_01535	0.77	+0.4
1,689,658	-		MIT1002_01535	0.77	+2.5
1,689,702	+		MIT1002_01535	0.79	-0.1
1,689,710	-		MIT1002_01535	0.80	+0.0
1,689,715	+		MIT1002_01535	0.80	-2.2
1,689,850	-		MIT1002_01535	0.85	+0.2
1,689,928	+		MIT1002_01535	0.88	+0.5
1,689,936	-		MIT1002_01535	0.89	-1.4
1,689,946	-		MIT1002_01535	0.89	-1.0
1,690,018	-				+0.2
1,690,020	+				+0.7
1,690,025	-				-0.3
1,690,116	+				-2.2
1,690,124	-				+0.0
1,690,159	+				+0.5
1,690,167	-				-3.1
1,690,216	+				+0.2
1,690,253	-				+1.3
1,690,438	+				+1.7
1,690,516	+				-0.3
1,690,534	-				+0.0
1,690,648	+		MIT1002_01537	0.10	+1.6
1,690,890	-		MIT1002_01537	0.29	-0.4
1,690,892	+		MIT1002_01537	0.29	-0.4
1,690,989	+		MIT1002_01537	0.36	-0.6
1,691,046	-		MIT1002_01537	0.41	-1.8
1,691,115	+		MIT1002_01537	0.46	+1.3
1,691,128	-		MIT1002_01537	0.47	-0.9