Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01450

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
1,595,078	+		MIT1002_01449	0.21	-1.6
1,595,100	-		MIT1002_01449	0.23	+1.3
1,595,123	+		MIT1002_01449	0.25	-1.0
1,595,123	+		MIT1002_01449	0.25	-0.4
1,595,131	-		MIT1002_01449	0.26	-2.8
1,595,131	-		MIT1002_01449	0.26	-1.6
1,595,131	-		MIT1002_01449	0.26	-0.0
1,595,131	-		MIT1002_01449	0.26	-0.8
1,595,142	+		MIT1002_01449	0.27	+2.0
1,595,157	-		MIT1002_01449	0.28	+1.8
1,595,157	-		MIT1002_01449	0.28	+0.6
1,595,175	+		MIT1002_01449	0.30	+2.0
1,595,175	+		MIT1002_01449	0.30	-2.8
1,595,183	-		MIT1002_01449	0.31	-0.1
1,595,190	+		MIT1002_01449	0.31	-0.8
1,595,266	+		MIT1002_01449	0.38	+2.1
1,595,310	-		MIT1002_01449	0.43	-1.6
1,595,312	+		MIT1002_01449	0.43	-1.2
1,595,408	-		MIT1002_01449	0.52	-1.0
1,595,418	+		MIT1002_01449	0.53	-0.4
1,595,505	+		MIT1002_01449	0.61	-1.3
1,595,505	+		MIT1002_01449	0.61	-0.6
1,595,505	+		MIT1002_01449	0.61	-2.2
1,595,506	-		MIT1002_01449	0.61	+1.6
1,595,507	+		MIT1002_01449	0.61	-0.7
1,595,513	-		MIT1002_01449	0.62	-2.1
1,595,641	+		MIT1002_01449	0.73	+1.0
1,595,641	+		MIT1002_01449	0.73	+1.7
1,595,658	+		MIT1002_01449	0.75	+1.1
1,595,658	+		MIT1002_01449	0.75	-1.5
1,595,679	+		MIT1002_01449	0.77	-1.0
1,595,780	+		MIT1002_01449	0.86	-1.3
1,595,820	+				+0.2
1,595,830	+				-0.6
1,595,857	-				+1.6
1,595,972	-				-0.2
1,595,974	+				+3.0
1,596,052	+				-0.3
1,596,053	+				+0.4
1,596,061	-				+0.0
1,596,159	+		MIT1002_01450	0.17	-0.6
1,596,268	+		MIT1002_01450	0.24	-2.2
1,596,509	+		MIT1002_01450	0.41	+0.6
1,596,509	+		MIT1002_01450	0.41	+1.4
1,596,517	-		MIT1002_01450	0.41	-0.8
1,596,517	-		MIT1002_01450	0.41	-0.8
1,596,517	-		MIT1002_01450	0.41	-0.9
1,596,517	-		MIT1002_01450	0.41	-0.5
1,596,517	-		MIT1002_01450	0.41	-1.2
1,596,551	+		MIT1002_01450	0.44	-1.6
1,596,555	+		MIT1002_01450	0.44	+0.6
1,596,563	-		MIT1002_01450	0.45	-0.9
1,596,569	-		MIT1002_01450	0.45	+0.8
1,596,583	+		MIT1002_01450	0.46	+0.4
1,596,583	+		MIT1002_01450	0.46	+0.0
1,596,591	-		MIT1002_01450	0.47	-0.9
1,596,591	-		MIT1002_01450	0.47	-0.4
1,596,610	-		MIT1002_01450	0.48	-0.9
1,596,692	+		MIT1002_01450	0.54	+0.6
1,596,706	-		MIT1002_01450	0.55	-1.9
1,596,706	-		MIT1002_01450	0.55	-2.0
1,596,758	-		MIT1002_01450	0.58	+0.2
1,596,759	-		MIT1002_01450	0.58	+0.9
1,596,771	+		MIT1002_01450	0.59	+1.4
1,596,784	+		MIT1002_01450	0.60	-0.4
1,596,835	+		MIT1002_01450	0.64	-1.0
1,596,889	-		MIT1002_01450	0.67	-1.0
1,596,946	+		MIT1002_01450	0.71	-1.3
1,597,044	+		MIT1002_01450	0.78	-0.1
1,597,056	+		MIT1002_01450	0.79	-0.7
1,597,056	+		MIT1002_01450	0.79	+1.0
1,597,064	-		MIT1002_01450	0.80	-0.1
1,597,116	+		MIT1002_01450	0.83	-0.4
1,597,124	-		MIT1002_01450	0.84	+1.4
1,597,160	-		MIT1002_01450	0.86	+0.3
1,597,232	-				+2.0
1,597,270	+				-0.1
1,597,430	+				+2.7
1,597,430	+				+1.0
1,597,430	+				-1.6
1,597,438	-				-0.7
1,597,438	-				-2.0
1,597,438	-				+1.5
1,597,438	-				-0.1
1,597,438	-				+0.3
1,597,438	-				-2.7
1,597,438	-				-1.6
1,597,438	-				+0.3
1,597,438	-				+1.4
1,597,438	-				-2.6
1,597,442	+				+0.9
1,597,449	+				-2.0
1,597,449	+				+0.1
1,597,472	-				-1.2
1,597,477	-				-2.0
1,597,477	-				-1.0
1,597,498	+				-1.2
1,597,506	-				-1.7
1,597,602	-		MIT1002_01451	0.11	+0.6
1,597,653	+		MIT1002_01451	0.15	+0.6
1,597,653	+		MIT1002_01451	0.15	-3.6
1,597,671	+		MIT1002_01451	0.16	-1.6
1,597,674	-		MIT1002_01451	0.16	+0.1
1,597,676	+		MIT1002_01451	0.17	-1.2
1,597,679	-		MIT1002_01451	0.17	-1.4
1,597,679	-		MIT1002_01451	0.17	+1.6
1,597,679	-		MIT1002_01451	0.17	-0.0
1,597,679	-		MIT1002_01451	0.17	+1.1
1,597,696	+		MIT1002_01451	0.18	-0.5
1,597,696	+		MIT1002_01451	0.18	-0.0
1,597,704	-		MIT1002_01451	0.19	+0.2
1,597,704	-		MIT1002_01451	0.19	-0.4
1,597,704	-		MIT1002_01451	0.19	+0.4
1,597,704	-		MIT1002_01451	0.19	+0.1
1,597,704	-		MIT1002_01451	0.19	-0.8
1,597,704	-		MIT1002_01451	0.19	+2.4
1,597,777	-		MIT1002_01451	0.24	+0.6
1,597,811	-		MIT1002_01451	0.27	+0.0
1,597,876	-		MIT1002_01451	0.32	-2.2
1,597,876	-		MIT1002_01451	0.32	-0.5
1,597,878	-		MIT1002_01451	0.32	-0.5
1,597,960	+		MIT1002_01451	0.38	-0.5
1,597,965	-		MIT1002_01451	0.39	-0.0
1,598,071	+		MIT1002_01451	0.47	-2.1
1,598,071	+		MIT1002_01451	0.47	+0.5
1,598,079	-		MIT1002_01451	0.48	+1.9
1,598,079	-		MIT1002_01451	0.48	-0.5
1,598,079	-		MIT1002_01451	0.48	-0.9
1,598,081	-		MIT1002_01451	0.48	+0.4
1,598,089	-		MIT1002_01451	0.48	-1.4
1,598,091	+		MIT1002_01451	0.49	-1.1
1,598,091	+		MIT1002_01451	0.49	+1.4
1,598,091	+		MIT1002_01451	0.49	+1.6
1,598,091	+		MIT1002_01451	0.49	+1.2
1,598,099	-		MIT1002_01451	0.49	-0.6
1,598,099	-		MIT1002_01451	0.49	+1.1
1,598,099	-		MIT1002_01451	0.49	+0.0
1,598,099	-		MIT1002_01451	0.49	+0.3
1,598,099	-		MIT1002_01451	0.49	+0.3
1,598,099	-		MIT1002_01451	0.49	+1.0
1,598,099	-		MIT1002_01451	0.49	-1.0
1,598,099	-		MIT1002_01451	0.49	-0.8
1,598,111	+		MIT1002_01451	0.50	+1.4
1,598,351	+		MIT1002_01451	0.69	+0.8