Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01362

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
1,507,336	-		MIT1002_01361	0.22	-0.3
1,507,343	+		MIT1002_01361	0.23	-1.1
1,507,381	-		MIT1002_01361	0.29	-1.4
1,507,499	-		MIT1002_01361	0.48	-0.5
1,507,592	+		MIT1002_01361	0.63	-1.9
1,507,600	-		MIT1002_01361	0.65	+0.1
1,507,600	-		MIT1002_01361	0.65	-0.2
1,507,612	-		MIT1002_01361	0.67	+1.4
1,507,617	+		MIT1002_01361	0.67	+1.1
1,507,617	+		MIT1002_01361	0.67	+0.3
1,507,647	-		MIT1002_01361	0.72	-3.0
1,507,707	+		MIT1002_01361	0.82	-1.7
1,507,721	-		MIT1002_01361	0.84	-2.2
1,507,806	-				-2.0
1,507,808	+				+0.7
1,507,808	+				+1.1
1,507,816	-				+0.7
1,507,956	+				+0.3
1,507,957	-				-1.1
1,508,291	+				-1.0
1,508,307	-				-0.5
1,508,370	-				-3.0
1,508,430	+				-1.3
1,508,435	+				-0.4
1,508,453	-				+0.3
1,508,470	-				-1.2
1,508,493	-				+0.3
1,508,569	+		MIT1002_01362	0.12	-0.2
1,508,577	-		MIT1002_01362	0.12	-1.0
1,508,579	-		MIT1002_01362	0.12	-2.0
1,508,588	+		MIT1002_01362	0.13	-2.6
1,508,588	+		MIT1002_01362	0.13	-0.9
1,508,621	-		MIT1002_01362	0.14	-2.2
1,508,653	-		MIT1002_01362	0.16	-0.6
1,508,678	+		MIT1002_01362	0.17	-0.7
1,508,678	+		MIT1002_01362	0.17	+0.1
1,508,681	-		MIT1002_01362	0.17	-2.3
1,508,693	+		MIT1002_01362	0.18	-2.1
1,508,749	+		MIT1002_01362	0.20	-2.0
1,508,761	+		MIT1002_01362	0.21	-0.9
1,508,851	+		MIT1002_01362	0.25	-2.2
1,508,903	-		MIT1002_01362	0.28	-1.1
1,508,945	-		MIT1002_01362	0.30	-2.2
1,508,947	+		MIT1002_01362	0.30	-3.1
1,508,971	-		MIT1002_01362	0.31	-0.2
1,509,066	+		MIT1002_01362	0.36	-3.0
1,509,076	+		MIT1002_01362	0.36	+0.4
1,509,076	+		MIT1002_01362	0.36	-2.4
1,509,187	+		MIT1002_01362	0.41	-1.4
1,509,247	+		MIT1002_01362	0.44	-3.5
1,509,247	+		MIT1002_01362	0.44	-3.8
1,509,255	+		MIT1002_01362	0.45	-1.4
1,509,263	-		MIT1002_01362	0.45	-0.3
1,509,263	-		MIT1002_01362	0.45	-1.9
1,509,288	+		MIT1002_01362	0.46	+1.1
1,509,301	-		MIT1002_01362	0.47	-1.0
1,509,301	-		MIT1002_01362	0.47	-1.4
1,509,323	+		MIT1002_01362	0.48	-1.4
1,509,356	+		MIT1002_01362	0.49	-1.9
1,509,364	-		MIT1002_01362	0.50	-1.8
1,509,368	+		MIT1002_01362	0.50	-3.6
1,509,376	-		MIT1002_01362	0.50	-1.8
1,509,410	-		MIT1002_01362	0.52	-2.2
1,509,544	-		MIT1002_01362	0.59	+0.4
1,509,549	-		MIT1002_01362	0.59	-2.1
1,509,559	+		MIT1002_01362	0.59	-1.7
1,509,571	+		MIT1002_01362	0.60	-1.2
1,509,574	-		MIT1002_01362	0.60	-2.7
1,509,617	+		MIT1002_01362	0.62	-1.3
1,509,623	+		MIT1002_01362	0.62	-0.8
1,509,666	+		MIT1002_01362	0.64	-1.9
1,509,718	+		MIT1002_01362	0.67	-0.6
1,509,731	-		MIT1002_01362	0.67	-1.0
1,509,733	+		MIT1002_01362	0.68	-1.8
1,509,733	+		MIT1002_01362	0.68	-1.9
1,509,739	+		MIT1002_01362	0.68	-2.5
1,509,741	+		MIT1002_01362	0.68	-1.2
1,509,783	-		MIT1002_01362	0.70	+1.4
1,509,803	+		MIT1002_01362	0.71	-2.9
1,509,901	+		MIT1002_01362	0.76	-1.6
1,509,934	+		MIT1002_01362	0.77	-1.7
1,509,934	+		MIT1002_01362	0.77	-3.1
1,509,992	-		MIT1002_01362	0.80	-1.1
1,509,997	-		MIT1002_01362	0.80	-1.3
1,510,091	+		MIT1002_01362	0.85	-1.8
1,510,091	+		MIT1002_01362	0.85	-3.6
1,510,091	+		MIT1002_01362	0.85	-0.7
1,510,099	-		MIT1002_01362	0.85	-1.3
1,510,099	-		MIT1002_01362	0.85	-2.4
1,510,099	-		MIT1002_01362	0.85	-0.7
1,510,099	-		MIT1002_01362	0.85	-3.1
1,510,147	-		MIT1002_01362	0.87	+0.3
1,510,208	-				-1.5
1,510,233	-				-3.8
1,510,333	+				-2.2
1,510,507	-				+0.3
1,510,523	+				-0.7
1,510,531	-				+0.1
1,510,617	-		MIT1002_01363	0.23	-1.4
1,510,682	+		MIT1002_01363	0.37	-0.1
1,510,742	+		MIT1002_01363	0.49	+0.1
1,510,750	-		MIT1002_01363	0.50	-0.2
1,510,860	+		MIT1002_01363	0.73	+0.8
1,510,991	-				-0.0
1,510,996	-				-1.6
1,511,113	+				+1.2
1,511,113	+				+1.6
1,511,119	-				+1.1
1,511,119	-				+1.1
1,511,133	+				+0.0
1,511,150	-				-0.0
1,511,197	-				+1.0
1,511,228	+				+1.4
1,511,230	-				-0.6
1,511,259	+				-1.3
1,511,259	+				+0.3
1,511,267	-				+1.7
1,511,267	-				+0.1
1,511,284	-				+1.0
1,511,387	-				-1.4