Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01351

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
1,494,381	+		MIT1002_01350	0.69	-1.0
1,494,469	-		MIT1002_01350	0.73	-0.7
1,494,469	-		MIT1002_01350	0.73	-1.0
1,494,520	+		MIT1002_01350	0.75	-0.4
1,494,520	+		MIT1002_01350	0.75	+0.6
1,494,535	-		MIT1002_01350	0.75	-0.9
1,494,535	-		MIT1002_01350	0.75	-0.1
1,494,535	-		MIT1002_01350	0.75	-0.1
1,494,586	+		MIT1002_01350	0.77	+0.9
1,494,586	+		MIT1002_01350	0.77	+0.4
1,494,586	+		MIT1002_01350	0.77	+1.0
1,494,638	-		MIT1002_01350	0.79	-0.9
1,494,638	-		MIT1002_01350	0.79	-1.4
1,494,671	+		MIT1002_01350	0.81	+2.0
1,494,679	-		MIT1002_01350	0.81	-1.9
1,494,686	+		MIT1002_01350	0.81	+2.1
1,494,708	-		MIT1002_01350	0.82	-0.1
1,494,710	+		MIT1002_01350	0.82	-2.8
1,494,710	+		MIT1002_01350	0.82	-0.6
1,494,710	+		MIT1002_01350	0.82	-2.7
1,494,718	-		MIT1002_01350	0.83	-2.2
1,494,718	-		MIT1002_01350	0.83	+0.4
1,494,718	-		MIT1002_01350	0.83	-0.1
1,494,769	+		MIT1002_01350	0.85	+1.3
1,494,775	-		MIT1002_01350	0.85	-1.8
1,494,801	-		MIT1002_01350	0.86	+0.1
1,494,803	+		MIT1002_01350	0.86	+0.2
1,494,816	+		MIT1002_01350	0.87	+1.9
1,494,822	-		MIT1002_01350	0.87	+1.8
1,494,822	-		MIT1002_01350	0.87	+0.6
1,494,822	-		MIT1002_01350	0.87	-0.4
1,494,891	+		MIT1002_01350	0.90	-1.3
1,495,060	+				+1.7
1,495,115	-				+0.5
1,495,127	+				-1.7
1,495,150	+				-0.1
1,495,160	+				-1.1
1,495,268	+				-1.2
1,495,442	+		MIT1002_01351	0.33	-0.7
1,495,450	-		MIT1002_01351	0.36	-1.9
1,495,457	+		MIT1002_01351	0.38	-2.4
1,495,542	+		MIT1002_01351	0.61	-0.0
1,495,574	+		MIT1002_01351	0.70	+1.0
1,495,652	-				+1.0
1,495,662	+				+0.3
1,495,829	-				-2.2
1,495,829	-				-0.6
1,495,852	+				-1.9
1,495,892	+				-2.2
1,495,930	+		MIT1002_01352	0.12	-1.0
1,495,930	+		MIT1002_01352	0.12	-0.1
1,495,930	+		MIT1002_01352	0.12	-0.9
1,495,930	+		MIT1002_01352	0.12	-1.4
1,495,931	-		MIT1002_01352	0.12	-2.7
1,495,931	-		MIT1002_01352	0.12	-3.6
1,495,938	-		MIT1002_01352	0.12	-0.9
1,495,938	-		MIT1002_01352	0.12	-0.7
1,495,938	-		MIT1002_01352	0.12	+0.7
1,495,938	-		MIT1002_01352	0.12	+1.1
1,495,938	-		MIT1002_01352	0.12	-0.5
1,495,938	-		MIT1002_01352	0.12	+0.1
1,495,938	-		MIT1002_01352	0.12	+0.3
1,495,938	-		MIT1002_01352	0.12	+1.6
1,495,938	-		MIT1002_01352	0.12	-0.9
1,495,940	+		MIT1002_01352	0.12	-0.2
1,495,960	+		MIT1002_01352	0.14	-0.1
1,496,003	+		MIT1002_01352	0.18	-1.1
1,496,087	+		MIT1002_01352	0.26	-2.9
1,496,087	+		MIT1002_01352	0.26	-1.6
1,496,117	+		MIT1002_01352	0.28	-2.4
1,496,122	-		MIT1002_01352	0.29	-1.3
1,496,145	+		MIT1002_01352	0.31	-2.0
1,496,199	+		MIT1002_01352	0.35	-2.2
1,496,199	+		MIT1002_01352	0.35	-2.1
1,496,207	-		MIT1002_01352	0.36	-0.7
1,496,257	+		MIT1002_01352	0.41	+0.1
1,496,265	-		MIT1002_01352	0.41	+0.1
1,496,267	+		MIT1002_01352	0.42	-1.7
1,496,280	-		MIT1002_01352	0.43	-2.3
1,496,284	-		MIT1002_01352	0.43	-2.8
1,496,398	+		MIT1002_01352	0.53	-3.5
1,496,398	+		MIT1002_01352	0.53	-1.4
1,496,401	-		MIT1002_01352	0.53	-1.5
1,496,458	+		MIT1002_01352	0.58	-2.6
1,496,486	-		MIT1002_01352	0.61	-3.7
1,496,522	-		MIT1002_01352	0.64	-1.2
1,496,626	+		MIT1002_01352	0.73	-0.8