Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01322

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
1,466,908	-				+0.6
1,466,957	+				+3.6
1,466,957	+				+2.2
1,466,965	-				-1.9
1,466,965	-				-0.1
1,466,965	-				-1.6
1,467,102	+				+0.8
1,467,124	-				+0.9
1,467,151	+				+0.1
1,467,159	-				+1.9
1,467,253	-				+0.9
1,467,273	-				-0.3
1,467,273	-				+0.6
1,467,317	-				-0.4
1,467,336	-		MIT1002_01321	0.14	+0.2
1,467,356	+		MIT1002_01321	0.18	-0.6
1,467,472	+		MIT1002_01321	0.45	-2.5
1,467,490	-		MIT1002_01321	0.49	-1.6
1,467,490	-		MIT1002_01321	0.49	+2.0
1,467,509	-		MIT1002_01321	0.53	+0.6
1,467,544	+		MIT1002_01321	0.61	-0.8
1,467,544	+		MIT1002_01321	0.61	-0.0
1,467,557	-		MIT1002_01321	0.64	-0.6
1,467,580	+		MIT1002_01321	0.69	-0.3
1,467,580	+		MIT1002_01321	0.69	-0.9
1,467,585	+		MIT1002_01321	0.70	+0.1
1,467,782	+				+1.7
1,467,787	+				-0.0
1,467,793	-				+0.1
1,467,834	+				+0.7
1,467,842	-				-0.4
1,467,842	-				-0.9
1,467,866	-				-0.7
1,467,875	+				+1.1
1,467,883	-				+1.5
1,467,883	-				+0.6
1,467,887	+				+0.9
1,467,887	+				+0.9
1,467,919	+				+1.4
1,467,944	-				+1.1
1,468,000	-				+0.9
1,468,021	-				+1.3
1,468,032	+				+1.4
1,468,032	+				+1.1
1,468,155	+		MIT1002_01322	0.12	+0.1
1,468,163	-		MIT1002_01322	0.13	+1.3
1,468,209	-		MIT1002_01322	0.15	-0.9
1,468,274	-		MIT1002_01322	0.18	+0.9
1,468,318	-		MIT1002_01322	0.20	+1.7
1,468,365	-		MIT1002_01322	0.23	-0.3
1,468,421	+		MIT1002_01322	0.25	+0.0
1,468,429	-		MIT1002_01322	0.26	-0.7
1,468,454	-		MIT1002_01322	0.27	+1.1
1,468,737	-		MIT1002_01322	0.41	+1.1
1,468,795	+		MIT1002_01322	0.43	-0.5
1,468,796	+		MIT1002_01322	0.43	-0.5
1,468,866	+		MIT1002_01322	0.47	-2.2
1,468,904	+		MIT1002_01322	0.49	+0.6
1,468,909	+		MIT1002_01322	0.49	+1.0
1,468,917	-		MIT1002_01322	0.49	+1.4
1,468,944	-		MIT1002_01322	0.51	-0.6
1,468,948	+		MIT1002_01322	0.51	-0.3
1,468,959	+		MIT1002_01322	0.51	-0.0
1,468,959	+		MIT1002_01322	0.51	+1.0
1,468,967	-		MIT1002_01322	0.52	-0.6
1,469,002	+		MIT1002_01322	0.53	-0.2
1,469,002	+		MIT1002_01322	0.53	-0.6
1,469,010	+		MIT1002_01322	0.54	-0.1
1,469,010	-		MIT1002_01322	0.54	-1.2
1,469,025	-		MIT1002_01322	0.54	-0.5
1,469,051	+		MIT1002_01322	0.56	-1.0
1,469,077	+		MIT1002_01322	0.57	+3.0
1,469,078	-		MIT1002_01322	0.57	-2.0
1,469,106	-		MIT1002_01322	0.58	+0.3
1,469,143	+		MIT1002_01322	0.60	+0.3
1,469,153	+		MIT1002_01322	0.61	+1.3
1,469,153	+		MIT1002_01322	0.61	+1.6
1,469,153	+		MIT1002_01322	0.61	+0.7
1,469,153	+		MIT1002_01322	0.61	+0.1
1,469,161	-		MIT1002_01322	0.61	-0.1
1,469,161	-		MIT1002_01322	0.61	+2.8
1,469,161	-		MIT1002_01322	0.61	+1.0
1,469,161	-		MIT1002_01322	0.61	-0.5
1,469,161	-		MIT1002_01322	0.61	-0.1
1,469,284	+		MIT1002_01322	0.67	-1.9
1,469,292	-		MIT1002_01322	0.67	-1.2
1,469,349	-		MIT1002_01322	0.70	+1.0
1,469,353	+		MIT1002_01322	0.70	+0.7
1,469,353	+		MIT1002_01322	0.70	-1.1
1,469,450	+		MIT1002_01322	0.75	-1.2
1,469,621	+		MIT1002_01322	0.83	+0.9
1,469,666	+		MIT1002_01322	0.85	+1.9
1,469,666	+		MIT1002_01322	0.85	+0.9
1,469,666	+		MIT1002_01322	0.85	-0.1
1,469,836	+				+1.3
1,469,854	+				+0.5
1,469,864	+				+2.0
1,469,887	+				-1.1
1,469,903	+				-0.4
1,469,912	-				+1.2
1,469,921	+				+0.5
1,469,932	-				-1.5
1,470,001	-				-1.4
1,470,003	+				+2.1
1,470,050	+				+0.1
1,470,058	-				+0.4
1,470,058	-				-0.1
1,470,208	+				-0.3
1,470,213	+				-0.2
1,470,216	-				+0.2
1,470,327	-		MIT1002_01323	0.20	+1.7
1,470,327	-		MIT1002_01323	0.20	+1.8
1,470,396	-		MIT1002_01323	0.45	-1.2
1,470,405	-		MIT1002_01323	0.48	+1.7
1,470,433	+		MIT1002_01323	0.58	-1.3
1,470,433	+		MIT1002_01323	0.58	+0.9
1,470,433	+		MIT1002_01323	0.58	+1.4
1,470,433	+		MIT1002_01323	0.58	-0.4
1,470,433	+		MIT1002_01323	0.58	+0.7
1,470,434	-		MIT1002_01323	0.58	-0.5
1,470,441	-		MIT1002_01323	0.61	+0.5
1,470,441	-		MIT1002_01323	0.61	+0.5
1,470,441	-		MIT1002_01323	0.61	-0.5
1,470,441	-		MIT1002_01323	0.61	-0.1
1,470,454	-		MIT1002_01323	0.66	+1.4
1,470,544	-				-0.6
1,470,570	+				-0.1
1,470,634	-				-0.5
1,470,634	-				-0.5
1,470,640	+				-0.8
1,470,650	+				-0.7
1,470,670	-				-0.8
1,470,673	+				+0.3
1,470,681	-				+1.4
1,470,794	+		MIT1002_01324	0.13	+0.8
1,470,812	-		MIT1002_01324	0.14	-1.7
1,470,908	-		MIT1002_01324	0.21	+0.0