Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01074

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
1,180,445	+				+0.6
1,180,445	+				+0.9
1,180,453	-				+0.6
1,180,453	-				+0.4
1,180,453	-				+2.3
1,180,455	+				+1.0
1,180,463	-				+1.4
1,180,463	-				+0.3
1,180,467	+				-0.1
1,180,468	+				-0.0
1,180,468	+				+0.0
1,180,468	+				+0.6
1,180,468	+				+0.7
1,180,475	-		MIT1002_01073	0.10	+1.9
1,180,678	+		MIT1002_01073	0.29	+1.1
1,180,768	-		MIT1002_01073	0.37	+2.0
1,180,776	-		MIT1002_01073	0.38	-0.3
1,180,783	-		MIT1002_01073	0.39	+1.9
1,180,853	+		MIT1002_01073	0.45	+1.0
1,180,853	+		MIT1002_01073	0.45	+2.2
1,180,861	-		MIT1002_01073	0.46	-1.3
1,180,861	-		MIT1002_01073	0.46	+0.5
1,180,861	-		MIT1002_01073	0.46	+0.8
1,180,861	-		MIT1002_01073	0.46	+1.0
1,180,950	-		MIT1002_01073	0.54	+0.6
1,180,955	-		MIT1002_01073	0.55	+0.3
1,181,105	+		MIT1002_01073	0.68	-0.6
1,181,145	+		MIT1002_01073	0.72	+1.0
1,181,153	+		MIT1002_01073	0.73	-0.4
1,181,156	+		MIT1002_01073	0.73	+1.2
1,181,181	+		MIT1002_01073	0.75	+1.2
1,181,181	+		MIT1002_01073	0.75	+1.7
1,181,181	+		MIT1002_01073	0.75	+0.5
1,181,188	-		MIT1002_01073	0.76	+0.2
1,181,189	-		MIT1002_01073	0.76	+1.2
1,181,244	-		MIT1002_01073	0.81	-0.1
1,181,269	-		MIT1002_01073	0.84	-1.7
1,181,295	+		MIT1002_01073	0.86	+0.8
1,181,425	-				-0.3
1,181,545	+		MIT1002_01074	0.14	+1.2
1,181,557	+		MIT1002_01074	0.16	+0.0
1,181,632	+		MIT1002_01074	0.27	+1.4
1,181,632	-		MIT1002_01074	0.27	-0.7
1,181,699	+		MIT1002_01074	0.36	+1.3
1,181,704	+		MIT1002_01074	0.37	-0.3
1,181,705	-		MIT1002_01074	0.37	-1.8
1,181,716	+		MIT1002_01074	0.39	-0.3
1,181,722	-		MIT1002_01074	0.39	+0.1
1,181,738	+		MIT1002_01074	0.42	+0.6
1,181,740	+		MIT1002_01074	0.42	-0.2
1,181,824	-		MIT1002_01074	0.54	+0.8
1,181,833	-		MIT1002_01074	0.55	+0.6
1,181,841	-		MIT1002_01074	0.56	+0.3
1,181,965	+		MIT1002_01074	0.74	+0.4
1,182,030	+		MIT1002_01074	0.83	+0.3
1,182,030	+		MIT1002_01074	0.83	-0.6
1,182,139	-				-0.2
1,182,203	+				-0.4
1,182,232	-				-0.6
1,182,371	-		MIT1002_01075	0.32	-0.3
1,182,376	-		MIT1002_01075	0.33	-0.1
1,182,388	+		MIT1002_01075	0.35	+0.7
1,182,396	-		MIT1002_01075	0.36	+0.3
1,182,396	-		MIT1002_01075	0.36	-1.2
1,182,411	+		MIT1002_01075	0.38	-0.3
1,182,443	-		MIT1002_01075	0.44	-0.2
1,182,445	+		MIT1002_01075	0.44	+0.3
1,182,618	+		MIT1002_01075	0.72	-0.8
1,182,626	+		MIT1002_01075	0.73	+1.0
1,182,647	-		MIT1002_01075	0.76	-0.1
1,182,701	-		MIT1002_01075	0.85	+0.9
1,182,720	+		MIT1002_01075	0.88	+1.1
1,182,720	+		MIT1002_01075	0.88	-0.3
1,182,728	-		MIT1002_01075	0.89	+2.7
1,182,798	+				-1.3
1,182,798	+				+0.8
1,182,806	-				+0.2
1,182,909	-		MIT1002_01076	0.12	-2.7
1,182,953	+		MIT1002_01076	0.16	+1.3
1,182,962	-		MIT1002_01076	0.17	+0.6
1,182,969	+		MIT1002_01076	0.17	+1.0
1,182,979	+		MIT1002_01076	0.18	+0.8
1,182,987	-		MIT1002_01076	0.19	+0.1
1,182,987	-		MIT1002_01076	0.19	-0.0
1,183,087	-		MIT1002_01076	0.29	+1.0
1,183,105	+		MIT1002_01076	0.31	+0.4
1,183,113	-		MIT1002_01076	0.31	+0.1
1,183,135	+		MIT1002_01076	0.33	-1.1
1,183,135	+		MIT1002_01076	0.33	+1.3
1,183,140	+		MIT1002_01076	0.34	+1.6