Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00939

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 6
1,039,037	-				-1.3
1,039,059	+				+1.0
1,039,171	+				+1.5
1,039,174	-				-1.9
1,039,176	+				+1.3
1,039,190	+				+1.1
1,039,251	-		MIT1002_00938	0.17	+1.0
1,039,323	+		MIT1002_00938	0.26	-2.2
1,039,355	-		MIT1002_00938	0.30	+0.8
1,039,355	-		MIT1002_00938	0.30	+1.6
1,039,367	+		MIT1002_00938	0.32	+0.3
1,039,375	-		MIT1002_00938	0.33	+0.2
1,039,375	-		MIT1002_00938	0.33	+0.8
1,039,375	-		MIT1002_00938	0.33	-0.1
1,039,380	-		MIT1002_00938	0.33	-1.9
1,039,431	+		MIT1002_00938	0.40	+0.6
1,039,494	-		MIT1002_00938	0.48	+1.3
1,039,507	-		MIT1002_00938	0.49	+0.0
1,039,511	+		MIT1002_00938	0.50	+0.5
1,039,511	+		MIT1002_00938	0.50	-0.6
1,039,753	+		MIT1002_00938	0.80	+0.1
1,039,753	+		MIT1002_00938	0.80	+2.7
1,039,753	+		MIT1002_00938	0.80	+0.7
1,039,761	-		MIT1002_00938	0.81	+1.6
1,039,761	-		MIT1002_00938	0.81	+1.6
1,039,822	+		MIT1002_00938	0.89	-0.9
1,039,879	+				-0.5
1,039,902	-				-0.1
1,040,008	+				-0.6
1,040,039	-				+0.7
1,040,049	-				-1.2
1,040,121	+				+0.0
1,040,121	+				-1.8
1,040,155	+		MIT1002_00939	0.11	+0.4
1,040,171	-		MIT1002_00939	0.13	-1.6
1,040,171	-		MIT1002_00939	0.13	-0.2
1,040,247	+		MIT1002_00939	0.20	-0.7
1,040,255	-		MIT1002_00939	0.20	+1.0
1,040,257	+		MIT1002_00939	0.20	-2.4
1,040,265	-		MIT1002_00939	0.21	+0.4
1,040,444	-		MIT1002_00939	0.37	+0.2
1,040,480	+		MIT1002_00939	0.40	+0.1
1,040,482	+		MIT1002_00939	0.40	+2.2
1,040,490	-		MIT1002_00939	0.41	+2.9
1,040,574	+		MIT1002_00939	0.48	+0.7
1,040,589	+		MIT1002_00939	0.50	+0.1
1,040,597	+		MIT1002_00939	0.50	+1.6
1,040,604	+		MIT1002_00939	0.51	-0.7
1,040,612	-		MIT1002_00939	0.52	+1.4
1,040,698	+		MIT1002_00939	0.59	-1.9
1,040,698	+		MIT1002_00939	0.59	-1.4
1,040,698	+		MIT1002_00939	0.59	-0.1
1,040,698	+		MIT1002_00939	0.59	-0.6
1,040,701	-		MIT1002_00939	0.59	+1.3
1,040,706	-		MIT1002_00939	0.60	-2.5
1,040,756	+		MIT1002_00939	0.64	+0.6
1,040,757	-		MIT1002_00939	0.64	-0.2
1,040,856	+		MIT1002_00939	0.73	+0.9
1,040,864	-		MIT1002_00939	0.74	+2.9
1,040,881	+		MIT1002_00939	0.75	-0.7
1,040,968	-		MIT1002_00939	0.83	+0.2
1,041,110	+				-0.9
1,041,110	+				+0.7
1,041,110	+				+0.0
1,041,118	-				-0.1
1,041,118	-				+0.3
1,041,118	-				+0.7
1,041,144	-				-1.3
1,041,220	-		MIT1002_00940	0.11	+2.4
1,041,266	-		MIT1002_00940	0.18	+1.0
1,041,266	-		MIT1002_00940	0.18	-0.6
1,041,308	-		MIT1002_00940	0.25	-0.7
1,041,397	-		MIT1002_00940	0.40	-0.2
1,041,428	-		MIT1002_00940	0.45	+0.7
1,041,429	+		MIT1002_00940	0.45	+0.1
1,041,429	+		MIT1002_00940	0.45	-1.9
1,041,437	-		MIT1002_00940	0.47	-0.0
1,041,437	-		MIT1002_00940	0.47	-0.5
1,041,515	+		MIT1002_00940	0.60	-1.4
1,041,625	+		MIT1002_00940	0.78	+1.5
1,041,643	-		MIT1002_00940	0.81	+1.6
1,041,675	+		MIT1002_00940	0.86	-0.1
1,041,676	-		MIT1002_00940	0.86	-2.1
1,041,704	+				-0.7
1,041,824	-				-0.2
1,041,835	+				+1.6
1,041,835	+				+0.3
1,041,842	+				+1.5
1,041,850	-				+0.1
1,041,857	+				+1.4
1,041,860	-				-0.8
1,041,866	-				-1.2
1,041,901	+				-1.1
1,041,903	+				+0.4
1,041,931	+				-2.1
1,041,931	+				+0.4
1,041,960	+				+0.4
1,041,960	+				+0.2