Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02767

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02766 and MPMX19_02767 are separated by 195 nucleotides MPMX19_02766: MPMX19_02766 - putative enoyl-CoA hydratase echA8, at 2,910,708 to 2,911,484 _02766 MPMX19_02767: MPMX19_02767 - 30S ribosomal protein S20, at 2,911,680 to 2,911,940 _02767 Position (kb) 2911 2912Strain fitness (log2 ratio) -3 -2 -1 0 1at 2910.714 kb on + strandat 2910.714 kb on + strandat 2910.714 kb on + strandat 2910.714 kb on + strandat 2910.715 kb on - strandat 2910.715 kb on - strandat 2910.715 kb on - strandat 2910.715 kb on - strandat 2910.715 kb on - strandat 2910.715 kb on - strandat 2910.715 kb on - strandat 2910.715 kb on - strandat 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.930 kb on + strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.931 kb on - strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.932 kb on + strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.933 kb on - strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.942 kb on + strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2910.943 kb on - strand, within MPMX19_02766at 2911.353 kb on + strand, within MPMX19_02766at 2911.353 kb on + strand, within MPMX19_02766at 2911.353 kb on + strand, within MPMX19_02766at 2911.353 kb on + strand, within MPMX19_02766at 2911.353 kb on + strand, within MPMX19_02766at 2911.354 kb on - strand, within MPMX19_02766at 2911.354 kb on - strand, within MPMX19_02766at 2911.354 kb on - strand, within MPMX19_02766at 2911.579 kb on + strandat 2912.038 kb on + strandat 2912.038 kb on + strandat 2912.039 kb on - strandat 2912.059 kb on + strandat 2912.059 kb on + strandat 2912.060 kb on - strandat 2912.060 kb on - strandat 2912.101 kb on + strandat 2912.101 kb on + strandat 2912.155 kb on + strandat 2912.155 kb on + strandat 2912.292 kb on + strandat 2912.292 kb on + strandat 2912.292 kb on + strandat 2912.296 kb on + strandat 2912.296 kb on + strandat 2912.296 kb on + strandat 2912.361 kb on + strandat 2912.361 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
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2,910,714 + +0.7
2,910,714 + -0.3
2,910,714 + -1.1
2,910,714 + +0.9
2,910,715 - -0.8
2,910,715 - +0.4
2,910,715 - +0.7
2,910,715 - +0.3
2,910,715 - +0.7
2,910,715 - -0.9
2,910,715 - -1.2
2,910,715 - -1.3
2,910,930 + MPMX19_02766 0.29 +0.2
2,910,930 + MPMX19_02766 0.29 +0.4
2,910,930 + MPMX19_02766 0.29 +0.2
2,910,930 + MPMX19_02766 0.29 -0.8
2,910,930 + MPMX19_02766 0.29 -1.4
2,910,930 + MPMX19_02766 0.29 +0.4
2,910,930 + MPMX19_02766 0.29 +0.9
2,910,930 + MPMX19_02766 0.29 -0.3
2,910,930 + MPMX19_02766 0.29 -0.0
2,910,930 + MPMX19_02766 0.29 -0.8
2,910,930 + MPMX19_02766 0.29 +0.1
2,910,931 - MPMX19_02766 0.29 +0.2
2,910,931 - MPMX19_02766 0.29 -1.4
2,910,931 - MPMX19_02766 0.29 -0.3
2,910,931 - MPMX19_02766 0.29 -0.3
2,910,931 - MPMX19_02766 0.29 -0.5
2,910,931 - MPMX19_02766 0.29 +0.1
2,910,931 - MPMX19_02766 0.29 +0.4
2,910,931 - MPMX19_02766 0.29 -0.8
2,910,931 - MPMX19_02766 0.29 +0.1
2,910,931 - MPMX19_02766 0.29 -0.0
2,910,931 - MPMX19_02766 0.29 -1.7
2,910,931 - MPMX19_02766 0.29 -0.7
2,910,932 + MPMX19_02766 0.29 -0.1
2,910,932 + MPMX19_02766 0.29 -0.0
2,910,932 + MPMX19_02766 0.29 +0.3
2,910,932 + MPMX19_02766 0.29 -0.1
2,910,932 + MPMX19_02766 0.29 -0.8
2,910,932 + MPMX19_02766 0.29 -0.8
2,910,932 + MPMX19_02766 0.29 -0.8
2,910,932 + MPMX19_02766 0.29 +0.2
2,910,932 + MPMX19_02766 0.29 -1.1
2,910,932 + MPMX19_02766 0.29 +0.7
2,910,932 + MPMX19_02766 0.29 -0.9
2,910,932 + MPMX19_02766 0.29 -1.5
2,910,932 + MPMX19_02766 0.29 +0.5
2,910,932 + MPMX19_02766 0.29 -0.9
2,910,933 - MPMX19_02766 0.29 -0.1
2,910,933 - MPMX19_02766 0.29 -1.2
2,910,933 - MPMX19_02766 0.29 -0.3
2,910,933 - MPMX19_02766 0.29 +0.1
2,910,933 - MPMX19_02766 0.29 -0.9
2,910,933 - MPMX19_02766 0.29 +0.9
2,910,933 - MPMX19_02766 0.29 -0.5
2,910,933 - MPMX19_02766 0.29 +0.6
2,910,933 - MPMX19_02766 0.29 +1.3
2,910,933 - MPMX19_02766 0.29 -1.2
2,910,933 - MPMX19_02766 0.29 +0.3
2,910,933 - MPMX19_02766 0.29 -1.5
2,910,933 - MPMX19_02766 0.29 +0.3
2,910,933 - MPMX19_02766 0.29 +1.1
2,910,933 - MPMX19_02766 0.29 +0.9
2,910,933 - MPMX19_02766 0.29 -0.6
2,910,933 - MPMX19_02766 0.29 -0.7
2,910,933 - MPMX19_02766 0.29 -2.1
2,910,933 - MPMX19_02766 0.29 -1.9
2,910,933 - MPMX19_02766 0.29 -0.7
2,910,933 - MPMX19_02766 0.29 -0.0
2,910,942 + MPMX19_02766 0.30 -1.9
2,910,942 + MPMX19_02766 0.30 +0.1
2,910,942 + MPMX19_02766 0.30 +0.0
2,910,942 + MPMX19_02766 0.30 +0.5
2,910,942 + MPMX19_02766 0.30 +0.4
2,910,942 + MPMX19_02766 0.30 -2.1
2,910,942 + MPMX19_02766 0.30 -0.9
2,910,942 + MPMX19_02766 0.30 -0.8
2,910,943 - MPMX19_02766 0.30 -1.5
2,910,943 - MPMX19_02766 0.30 -0.7
2,910,943 - MPMX19_02766 0.30 -0.5
2,910,943 - MPMX19_02766 0.30 -0.2
2,910,943 - MPMX19_02766 0.30 +0.6
2,910,943 - MPMX19_02766 0.30 -0.7
2,910,943 - MPMX19_02766 0.30 -0.6
2,910,943 - MPMX19_02766 0.30 +0.0
2,910,943 - MPMX19_02766 0.30 +0.3
2,910,943 - MPMX19_02766 0.30 -2.8
2,910,943 - MPMX19_02766 0.30 -1.0
2,910,943 - MPMX19_02766 0.30 -1.1
2,911,353 + MPMX19_02766 0.83 -2.6
2,911,353 + MPMX19_02766 0.83 +0.9
2,911,353 + MPMX19_02766 0.83 +0.1
2,911,353 + MPMX19_02766 0.83 -1.3
2,911,353 + MPMX19_02766 0.83 -0.5
2,911,354 - MPMX19_02766 0.83 -1.5
2,911,354 - MPMX19_02766 0.83 -1.8
2,911,354 - MPMX19_02766 0.83 +0.9
2,911,579 + +0.3
2,912,038 + +1.3
2,912,038 + -0.7
2,912,039 - -1.0
2,912,059 + -0.1
2,912,059 + -0.9
2,912,060 - +0.5
2,912,060 - -0.1
2,912,101 + -0.7
2,912,101 + -1.4
2,912,155 + +0.1
2,912,155 + -0.7
2,912,292 + -1.3
2,912,292 + -1.0
2,912,292 + +0.1
2,912,296 + +0.5
2,912,296 + +0.3
2,912,296 + +1.3
2,912,361 + -1.3
2,912,361 + -1.1

Or see this region's nucleotide sequence