Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02268

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
2,386,026	+		MPMX19_02267	0.39	-0.2
2,386,094	-		MPMX19_02267	0.43	-0.8
2,386,097	+		MPMX19_02267	0.43	-0.2
2,386,097	+		MPMX19_02267	0.43	+0.2
2,386,098	-		MPMX19_02267	0.43	+0.8
2,386,098	-		MPMX19_02267	0.43	-0.5
2,386,417	-		MPMX19_02267	0.64	-0.8
2,386,497	+		MPMX19_02267	0.69	-0.8
2,386,816	-		MPMX19_02267	0.90	-0.2
2,386,960	+				+0.2
2,386,961	-				-1.0
2,386,961	-				+1.2
2,386,984	-				-0.1
2,386,984	-				-1.2
2,386,984	-				-2.3
2,386,984	-				-0.4
2,387,153	-		MPMX19_02268	0.10	+1.8
2,387,155	-		MPMX19_02268	0.11	-0.5
2,387,787	-		MPMX19_02268	0.49	+0.2
2,388,038	-		MPMX19_02268	0.64	+1.8
2,388,038	-		MPMX19_02268	0.64	+1.2
2,388,056	-		MPMX19_02268	0.65	-1.0
2,388,056	-		MPMX19_02268	0.65	-1.0
2,388,151	-		MPMX19_02268	0.71	-0.2
2,388,151	-		MPMX19_02268	0.71	-0.2
2,388,151	-		MPMX19_02268	0.71	+1.8
2,388,173	-		MPMX19_02268	0.72	+0.2
2,388,173	-		MPMX19_02268	0.72	+0.8
2,388,173	-		MPMX19_02268	0.72	-1.0
2,388,175	-		MPMX19_02268	0.73	-1.6
2,388,371	-		MPMX19_02268	0.84	-0.5
2,388,371	-		MPMX19_02268	0.84	-1.5
2,388,371	-		MPMX19_02268	0.84	-0.8
2,388,422	-		MPMX19_02268	0.88	-0.5
2,388,422	-		MPMX19_02268	0.88	-1.9
2,388,422	-		MPMX19_02268	0.88	-1.0
2,388,422	-		MPMX19_02268	0.88	-0.8
2,388,422	-		MPMX19_02268	0.88	-1.7
2,388,422	-		MPMX19_02268	0.88	+0.8
2,388,422	-		MPMX19_02268	0.88	-0.2
2,388,422	-		MPMX19_02268	0.88	-1.2
2,388,457	-		MPMX19_02268	0.90	+1.4
2,388,457	-		MPMX19_02268	0.90	-1.0
2,388,490	+				-1.2
2,388,491	-				-1.9
2,388,491	-				-0.7
2,388,491	-				-2.4
2,388,491	-				-1.9
2,388,491	-				-1.6
2,388,491	-				-1.1
2,388,543	+				-0.2
2,388,543	+				-1.5
2,388,544	-				+0.0
2,388,544	-				-1.0
2,388,544	-				+0.4
2,388,576	+				-1.0
2,388,576	+				-1.5
2,388,576	+				-1.3
2,388,576	+				-1.9
2,388,577	-				+0.6
2,388,577	-				-0.0
2,388,577	-				-0.2
2,388,577	-				-2.1
2,388,577	-				-1.8
2,388,577	-				-2.3
2,388,577	-				-1.6
2,388,577	-				-1.5
2,388,658	+				-0.2
2,388,658	+				+0.1
2,388,659	-				-0.8
2,388,659	-				+0.3
2,388,659	-				-1.0
2,388,659	-				+0.5
2,388,659	-				-2.4
2,388,659	-				-1.3
2,388,659	-				-1.3
2,388,659	-				-1.3
2,388,659	-				-1.8
2,388,659	-				+0.8
2,388,660	+				-0.3
2,388,660	+				+1.1
2,388,660	+				-2.2
2,388,660	+				+1.8
2,388,660	+				-1.5
2,388,660	+				-1.5
2,388,660	+				-1.6
2,388,660	+				+1.1
2,388,660	+				-1.6
2,388,660	+				-0.2
2,388,660	+				-0.0
2,388,660	+				-1.8
2,388,661	-				-1.9
2,388,661	-				+0.2
2,388,661	-				-0.8
2,388,661	-				-2.0
2,388,661	-				-1.2
2,388,661	-				-0.8
2,388,661	-				-1.2
2,388,661	-				-0.5
2,388,661	-				-2.6
2,388,661	-				+0.7
2,388,661	-				-1.1
2,388,661	-				-2.0
2,388,661	-				-0.2
2,388,661	-				-1.3
2,388,661	-				+0.1
2,388,661	-				+0.8
2,388,661	-				-1.2
2,388,661	-				-0.3
2,388,661	-				-0.2
2,388,661	-				-1.0
2,388,661	-				-0.2
2,388,661	-				-0.8
2,388,661	-				-1.2
2,388,661	-				-1.0
2,388,661	-				+1.6
2,388,661	-				+0.1
2,388,661	-				-1.8
2,388,661	-				+0.6
2,388,661	-				-1.2
2,388,661	-				-1.1
2,388,661	-				+1.8
2,388,661	-				-1.0
2,388,661	-				-2.6
2,388,661	-				-1.5
2,388,661	-				-2.2
2,388,661	-				-0.9
2,388,661	-				-1.2
2,388,661	-				-2.2
2,388,661	-				+0.2
2,388,661	-				-2.5
2,388,661	-				+0.0
2,388,661	-				-0.3
2,388,661	-				-0.5
2,388,661	-				-1.2
2,388,661	-				-0.8
2,388,661	-				+0.7
2,388,661	-				-0.4
2,388,661	-				-1.5
2,388,661	-				-0.2
2,388,661	-				-1.6
2,388,661	-				-0.5
2,388,661	-				-0.5
2,388,661	-				-3.2
2,388,664	+				-1.2
2,388,664	+				-1.6
2,388,664	+				-0.2
2,388,665	-				-0.8
2,388,665	-				+0.1
2,388,665	-				-0.6
2,388,665	-				-0.8
2,388,665	-				-2.4
2,388,665	-				-0.0
2,388,665	-				-1.7
2,388,665	-				-0.5
2,388,665	-				+0.2
2,388,665	-				-0.3
2,388,665	-				-1.3
2,388,665	-				+0.1
2,388,665	-				+1.2
2,388,665	-				+0.0
2,388,665	-				-1.6
2,388,665	-				+0.3
2,388,665	-				-1.5
2,388,665	-				-0.0
2,388,687	+				-1.0
2,388,687	+				-0.5
2,388,687	+				+0.8
2,388,688	-				-0.8
2,388,688	-				-0.9
2,388,688	-				-0.2
2,388,688	-				-0.9
2,388,688	-				-1.6
2,388,688	-				-1.8
2,388,688	-				-0.2
2,388,688	-				+0.2
2,388,688	-				-0.2
2,388,688	-				-0.8
2,388,694	-				-1.1
2,388,694	-				+0.4
2,388,784	+				+1.5
2,388,784	+				+0.5
2,388,784	+				-0.6
2,388,784	+				-0.8
2,388,784	+				+0.2
2,388,784	+				+0.7
2,388,784	+				-1.0
2,388,784	+				-0.2
2,388,784	+				-1.3
2,388,784	+				+0.0
2,388,785	-				+0.2
2,388,785	-				-1.0
2,388,785	-				-0.5
2,388,785	-				+0.5
2,388,785	-				-1.0
2,388,785	-				+0.1
2,388,785	-				+1.8
2,388,785	-				-0.8
2,388,785	-				-1.6
2,388,785	-				+1.8
2,388,785	-				-0.9
2,388,785	-				-0.4
2,388,785	-				+0.6
2,388,785	-				-0.2
2,388,785	-				+0.1
2,388,785	-				-0.0
2,388,785	-				-0.8
2,388,785	-				-0.5
2,388,785	-				+0.4
2,388,785	-				+0.4
2,388,785	-				+0.9
2,388,785	-				-1.8
2,388,785	-				-1.0
2,388,785	-				-0.4
2,388,821	+				-1.3
2,388,821	+				+1.2
2,388,821	+				+0.2
2,388,821	+				+0.8
2,388,821	+				-0.3
2,388,822	-				+0.2
2,388,822	-				-0.9
2,388,822	-				-0.1
2,388,822	-				-0.2
2,388,822	-				+1.3
2,388,822	-				+0.0
2,388,822	-				-1.5
2,388,822	-				-0.2
2,388,822	-				+0.1
2,388,822	-				+0.4
2,388,822	-				-0.8
2,388,896	+				+0.8
2,388,896	+				-1.6
2,388,896	+				+0.8
2,388,896	+				-1.5
2,388,897	-				-0.8
2,388,897	-				-0.8
2,388,897	-				+1.3
2,388,897	-				-1.5
2,388,897	-				-0.9
2,388,897	-				-0.5
2,388,897	-				-0.7
2,388,897	-				+0.2
2,388,897	-				-0.9
2,388,899	+				+0.7
2,388,899	+				-1.5
2,388,899	+				-0.7
2,388,899	+				-1.9
2,388,899	+				-1.5
2,388,899	+				-0.6
2,388,900	-				-1.2
2,388,900	-				-0.5
2,388,900	-				-1.0
2,388,900	-				-0.6
2,388,900	-				-1.1
2,388,900	-				-0.7
2,388,900	-				-0.5
2,388,920	-				+1.4
2,388,951	-				-0.3
2,388,984	+		MPMX19_02269	0.11	-0.1
2,388,984	+		MPMX19_02269	0.11	+0.7
2,388,984	+		MPMX19_02269	0.11	-3.5
2,388,984	+		MPMX19_02269	0.11	-0.1
2,388,984	+		MPMX19_02269	0.11	-1.0
2,388,984	+		MPMX19_02269	0.11	-1.3
2,388,984	+		MPMX19_02269	0.11	+1.2
2,388,984	+		MPMX19_02269	0.11	-0.3
2,388,984	+		MPMX19_02269	0.11	+1.1
2,388,984	+		MPMX19_02269	0.11	+0.5
2,388,984	+		MPMX19_02269	0.11	-2.5
2,388,985	-		MPMX19_02269	0.11	-0.3
2,388,985	-		MPMX19_02269	0.11	-0.8
2,388,985	-		MPMX19_02269	0.11	-0.8
2,388,985	-		MPMX19_02269	0.11	-0.5
2,388,985	-		MPMX19_02269	0.11	-0.5
2,388,985	-		MPMX19_02269	0.11	+0.7
2,388,985	-		MPMX19_02269	0.11	-0.5
2,388,985	-		MPMX19_02269	0.11	-0.6
2,388,985	-		MPMX19_02269	0.11	-0.2
2,388,985	-		MPMX19_02269	0.11	-0.3
2,388,985	-		MPMX19_02269	0.11	-0.3
2,388,985	-		MPMX19_02269	0.11	-1.3
2,388,985	-		MPMX19_02269	0.11	+0.2
2,388,985	-		MPMX19_02269	0.11	-0.8
2,388,988	+		MPMX19_02269	0.11	+1.8
2,388,988	+		MPMX19_02269	0.11	+1.2
2,388,989	-		MPMX19_02269	0.11	-0.4
2,388,989	-		MPMX19_02269	0.11	-0.8
2,389,097	-		MPMX19_02269	0.16	-0.8
2,389,097	-		MPMX19_02269	0.16	-0.8
2,389,116	+		MPMX19_02269	0.17	-0.8
2,389,117	-		MPMX19_02269	0.17	+0.9
2,389,117	-		MPMX19_02269	0.17	-1.3
2,389,131	+		MPMX19_02269	0.17	-0.2
2,389,132	-		MPMX19_02269	0.17	+0.4
2,389,143	-		MPMX19_02269	0.18	-1.2
2,389,148	+		MPMX19_02269	0.18	+0.5
2,389,199	+		MPMX19_02269	0.20	+2.2
2,389,199	+		MPMX19_02269	0.20	+0.8
2,389,199	+		MPMX19_02269	0.20	-0.5
2,389,199	+		MPMX19_02269	0.20	-1.0
2,389,200	-		MPMX19_02269	0.20	-2.2
2,389,200	-		MPMX19_02269	0.20	-1.6
2,389,201	+		MPMX19_02269	0.20	-1.6
2,389,201	+		MPMX19_02269	0.20	+2.8
2,389,201	+		MPMX19_02269	0.20	-2.2
2,389,202	-		MPMX19_02269	0.20	-0.3
2,389,202	-		MPMX19_02269	0.20	-1.3
2,389,209	-		MPMX19_02269	0.21	-0.5
2,389,209	-		MPMX19_02269	0.21	-1.2
2,389,209	-		MPMX19_02269	0.21	-2.3
2,389,209	-		MPMX19_02269	0.21	-0.9
2,389,363	+		MPMX19_02269	0.27	-0.5
2,389,364	-		MPMX19_02269	0.27	-1.9
2,389,364	-		MPMX19_02269	0.27	+0.2
2,389,364	-		MPMX19_02269	0.27	+0.1
2,389,364	-		MPMX19_02269	0.27	-1.7
2,389,364	-		MPMX19_02269	0.27	+0.3
2,389,364	-		MPMX19_02269	0.27	-0.4
2,389,366	+		MPMX19_02269	0.27	-1.0
2,389,366	+		MPMX19_02269	0.27	-0.5
2,389,366	+		MPMX19_02269	0.27	-1.2
2,389,367	-		MPMX19_02269	0.27	-0.6
2,389,367	-		MPMX19_02269	0.27	-0.5
2,389,385	+		MPMX19_02269	0.28	-0.7
2,389,386	-		MPMX19_02269	0.28	-1.5
2,389,391	+		MPMX19_02269	0.29	-2.1
2,389,391	+		MPMX19_02269	0.29	-1.6
2,389,391	+		MPMX19_02269	0.29	-2.0
2,389,392	-		MPMX19_02269	0.29	-1.2
2,389,392	-		MPMX19_02269	0.29	+1.5
2,389,392	-		MPMX19_02269	0.29	-1.8
2,389,440	+		MPMX19_02269	0.31	-0.2
2,389,440	+		MPMX19_02269	0.31	+0.4
2,389,440	+		MPMX19_02269	0.31	+1.2
2,389,440	+		MPMX19_02269	0.31	+0.2
2,389,441	-		MPMX19_02269	0.31	-0.9
2,389,441	-		MPMX19_02269	0.31	-1.0
2,389,452	+		MPMX19_02269	0.31	-0.6
2,389,452	+		MPMX19_02269	0.31	-0.2
2,389,452	+		MPMX19_02269	0.31	+0.4
2,389,452	+		MPMX19_02269	0.31	-1.1
2,389,453	-		MPMX19_02269	0.31	-0.5
2,389,558	+		MPMX19_02269	0.36	+1.1
2,389,558	+		MPMX19_02269	0.36	+0.2
2,389,624	+		MPMX19_02269	0.39	+1.6
2,389,624	+		MPMX19_02269	0.39	+1.2
2,389,624	+		MPMX19_02269	0.39	-0.2
2,389,625	-		MPMX19_02269	0.39	-0.5
2,389,625	-		MPMX19_02269	0.39	-1.5
2,389,625	-		MPMX19_02269	0.39	-2.1
2,389,625	-		MPMX19_02269	0.39	+0.8
2,389,625	-		MPMX19_02269	0.39	+0.1
2,389,625	-		MPMX19_02269	0.39	-0.6
2,389,625	-		MPMX19_02269	0.39	-0.7
2,389,625	-		MPMX19_02269	0.39	-0.9