Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_01050

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
1,089,514	+				-0.6
1,089,514	+				+0.3
1,089,514	+				-0.9
1,089,514	+				+0.4
1,089,514	+				+0.5
1,089,514	+				+0.4
1,089,515	-				-0.5
1,089,515	-				+0.2
1,089,515	-				-0.3
1,089,515	-				+0.2
1,089,618	+		MPMX19_01049	0.17	+1.3
1,089,618	+		MPMX19_01049	0.17	-0.7
1,089,618	+		MPMX19_01049	0.17	+0.0
1,089,618	+		MPMX19_01049	0.17	-1.8
1,089,618	+		MPMX19_01049	0.17	+0.0
1,089,618	+		MPMX19_01049	0.17	-1.4
1,089,618	+		MPMX19_01049	0.17	-1.8
1,089,618	+		MPMX19_01049	0.17	-0.5
1,089,618	+		MPMX19_01049	0.17	-2.8
1,089,618	+		MPMX19_01049	0.17	+0.0
1,089,618	+		MPMX19_01049	0.17	+0.5
1,089,618	+		MPMX19_01049	0.17	-0.2
1,089,618	+		MPMX19_01049	0.17	-0.4
1,089,618	+		MPMX19_01049	0.17	+0.9
1,089,618	+		MPMX19_01049	0.17	-0.5
1,089,618	+		MPMX19_01049	0.17	-1.0
1,089,618	+		MPMX19_01049	0.17	-2.6
1,089,619	-		MPMX19_01049	0.17	-0.1
1,089,619	-		MPMX19_01049	0.17	-1.0
1,089,619	-		MPMX19_01049	0.17	-0.7
1,089,619	-		MPMX19_01049	0.17	+1.2
1,089,619	-		MPMX19_01049	0.17	+0.2
1,089,619	-		MPMX19_01049	0.17	+0.0
1,089,619	-		MPMX19_01049	0.17	+0.9
1,089,619	-		MPMX19_01049	0.17	-1.3
1,089,619	-		MPMX19_01049	0.17	-1.2
1,089,619	-		MPMX19_01049	0.17	+1.4
1,089,619	-		MPMX19_01049	0.17	-0.7
1,089,619	-		MPMX19_01049	0.17	-0.8
1,089,619	-		MPMX19_01049	0.17	+0.6
1,089,619	-		MPMX19_01049	0.17	+0.0
1,089,619	-		MPMX19_01049	0.17	-1.7
1,089,687	+		MPMX19_01049	0.24	+1.0
1,089,687	+		MPMX19_01049	0.24	+1.2
1,089,687	+		MPMX19_01049	0.24	-0.9
1,089,687	+		MPMX19_01049	0.24	-1.4
1,089,687	+		MPMX19_01049	0.24	+1.0
1,089,688	-		MPMX19_01049	0.24	-1.0
1,089,688	-		MPMX19_01049	0.24	-0.3
1,089,688	-		MPMX19_01049	0.24	-0.8
1,089,688	-		MPMX19_01049	0.24	-0.4
1,089,688	-		MPMX19_01049	0.24	+0.4
1,089,688	-		MPMX19_01049	0.24	-0.1
1,089,688	-		MPMX19_01049	0.24	-1.0
1,089,690	+		MPMX19_01049	0.24	+0.0
1,089,690	+		MPMX19_01049	0.24	-3.1
1,089,690	+		MPMX19_01049	0.24	+0.4
1,089,690	+		MPMX19_01049	0.24	-0.3
1,089,690	+		MPMX19_01049	0.24	-3.4
1,089,690	+		MPMX19_01049	0.24	-1.7
1,089,690	+		MPMX19_01049	0.24	-0.6
1,089,690	+		MPMX19_01049	0.24	+0.2
1,089,690	+		MPMX19_01049	0.24	-0.1
1,089,690	+		MPMX19_01049	0.24	-0.6
1,089,690	+		MPMX19_01049	0.24	-1.4
1,089,690	+		MPMX19_01049	0.24	-0.2
1,089,690	+		MPMX19_01049	0.24	+0.8
1,089,691	-		MPMX19_01049	0.24	+1.4
1,089,691	-		MPMX19_01049	0.24	-0.7
1,089,691	-		MPMX19_01049	0.24	-0.3
1,089,691	-		MPMX19_01049	0.24	+1.4
1,089,691	-		MPMX19_01049	0.24	+0.6
1,089,691	-		MPMX19_01049	0.24	-1.4
1,089,691	-		MPMX19_01049	0.24	+0.6
1,089,691	-		MPMX19_01049	0.24	-1.3
1,089,691	-		MPMX19_01049	0.24	-0.1
1,089,691	-		MPMX19_01049	0.24	-1.1
1,089,742	+		MPMX19_01049	0.29	-0.8
1,089,742	+		MPMX19_01049	0.29	+0.6
1,089,742	+		MPMX19_01049	0.29	+0.0
1,089,742	+		MPMX19_01049	0.29	-1.5
1,089,742	+		MPMX19_01049	0.29	-0.4
1,089,742	+		MPMX19_01049	0.29	-0.7
1,089,742	+		MPMX19_01049	0.29	-1.1
1,089,743	-		MPMX19_01049	0.30	-0.0
1,089,759	+		MPMX19_01049	0.31	-1.4
1,089,759	+		MPMX19_01049	0.31	-2.0
1,089,760	-		MPMX19_01049	0.31	-1.8
1,089,760	-		MPMX19_01049	0.31	+0.0
1,089,760	-		MPMX19_01049	0.31	+0.0
1,089,873	+		MPMX19_01049	0.43	-2.4
1,089,885	+		MPMX19_01049	0.44	-0.2
1,089,885	+		MPMX19_01049	0.44	-1.2
1,089,885	+		MPMX19_01049	0.44	+0.0
1,089,885	+		MPMX19_01049	0.44	-1.1
1,089,885	+		MPMX19_01049	0.44	-0.6
1,089,885	+		MPMX19_01049	0.44	-0.4
1,089,885	+		MPMX19_01049	0.44	-0.8
1,089,885	+		MPMX19_01049	0.44	-2.7
1,089,885	+		MPMX19_01049	0.44	-0.7
1,089,885	+		MPMX19_01049	0.44	-0.2
1,089,886	-		MPMX19_01049	0.44	+0.4
1,089,886	-		MPMX19_01049	0.44	+0.7
1,089,886	-		MPMX19_01049	0.44	+0.2
1,089,886	-		MPMX19_01049	0.44	+0.1
1,089,886	-		MPMX19_01049	0.44	-1.4
1,089,886	-		MPMX19_01049	0.44	-0.7
1,089,886	-		MPMX19_01049	0.44	-1.1
1,089,886	-		MPMX19_01049	0.44	-0.4
1,089,886	-		MPMX19_01049	0.44	-1.6
1,089,886	-		MPMX19_01049	0.44	+0.1
1,089,886	-		MPMX19_01049	0.44	-1.0
1,089,886	-		MPMX19_01049	0.44	-2.1
1,090,173	+		MPMX19_01049	0.73	+1.3
1,090,173	+		MPMX19_01049	0.73	-0.8
1,090,173	+		MPMX19_01049	0.73	-0.6
1,090,173	+		MPMX19_01049	0.73	-0.6
1,090,174	-		MPMX19_01049	0.73	-0.1
1,090,174	-		MPMX19_01049	0.73	-1.8
1,090,182	+		MPMX19_01049	0.74	+0.2
1,090,182	+		MPMX19_01049	0.74	+0.6
1,090,182	+		MPMX19_01049	0.74	-0.4
1,090,182	+		MPMX19_01049	0.74	-0.8
1,090,182	+		MPMX19_01049	0.74	+0.3
1,090,182	+		MPMX19_01049	0.74	+0.4
1,090,182	+		MPMX19_01049	0.74	-1.6
1,090,182	+		MPMX19_01049	0.74	-2.9
1,090,183	-		MPMX19_01049	0.74	-0.5
1,090,183	-		MPMX19_01049	0.74	-1.1
1,090,183	-		MPMX19_01049	0.74	-0.1
1,090,183	-		MPMX19_01049	0.74	-0.4
1,090,183	-		MPMX19_01049	0.74	-0.7
1,090,183	-		MPMX19_01049	0.74	-0.1
1,090,183	-		MPMX19_01049	0.74	-0.6
1,090,183	-		MPMX19_01049	0.74	-0.3
1,090,183	-		MPMX19_01049	0.74	-0.7
1,090,184	+		MPMX19_01049	0.74	+0.6
1,090,184	+		MPMX19_01049	0.74	-0.1
1,090,184	+		MPMX19_01049	0.74	+1.6
1,090,184	+		MPMX19_01049	0.74	+1.2
1,090,184	+		MPMX19_01049	0.74	-0.6
1,090,184	+		MPMX19_01049	0.74	+0.3
1,090,185	-		MPMX19_01049	0.74	-1.6
1,090,185	-		MPMX19_01049	0.74	-1.0
1,090,185	-		MPMX19_01049	0.74	-0.9
1,090,224	+		MPMX19_01049	0.78	-0.9
1,090,224	+		MPMX19_01049	0.78	-0.1
1,090,224	+		MPMX19_01049	0.78	+1.0
1,090,225	-		MPMX19_01049	0.78	+0.4
1,090,261	-		MPMX19_01049	0.82	+0.0
1,090,269	+		MPMX19_01049	0.82	+0.2
1,090,269	+		MPMX19_01049	0.82	-0.6
1,090,270	-		MPMX19_01049	0.83	+1.0
1,090,270	-		MPMX19_01049	0.83	+1.2
1,090,270	-		MPMX19_01049	0.83	+0.0
1,090,270	-		MPMX19_01049	0.83	-0.7
1,090,314	+		MPMX19_01049	0.87	-0.6
1,090,315	-		MPMX19_01049	0.87	-0.6
1,090,315	-		MPMX19_01049	0.87	+0.1
1,090,361	+				-1.0
1,090,361	+				+0.0
1,090,361	+				-0.6
1,090,361	+				-0.6
1,090,362	-				+1.2
1,090,362	-				-0.5
1,090,362	-				-1.8
1,090,362	-				-0.2
1,090,362	-				+1.3
1,090,362	-				-0.1
1,090,362	-				+0.2
1,090,362	-				-1.5
1,090,362	-				-0.1
1,090,441	-				-1.3
1,090,630	+		MPMX19_01050	0.29	-1.4
1,090,630	+		MPMX19_01050	0.29	-0.5
1,090,631	-		MPMX19_01050	0.29	-2.1
1,091,303	+		MPMX19_01051	0.18	-0.4
1,091,303	+		MPMX19_01051	0.18	+0.2
1,091,303	+		MPMX19_01051	0.18	-0.5
1,091,303	+		MPMX19_01051	0.18	-0.1
1,091,303	+		MPMX19_01051	0.18	-0.9
1,091,303	+		MPMX19_01051	0.18	+1.3
1,091,304	-		MPMX19_01051	0.18	+1.6
1,091,304	-		MPMX19_01051	0.18	-0.7
1,091,304	-		MPMX19_01051	0.18	+0.6
1,091,304	-		MPMX19_01051	0.18	-0.4
1,091,304	-		MPMX19_01051	0.18	-0.7
1,091,363	+		MPMX19_01051	0.21	-1.4
1,091,363	+		MPMX19_01051	0.21	-0.8
1,091,363	+		MPMX19_01051	0.21	-1.2
1,091,363	+		MPMX19_01051	0.21	-0.1
1,091,363	+		MPMX19_01051	0.21	-1.8
1,091,363	+		MPMX19_01051	0.21	+0.3
1,091,363	+		MPMX19_01051	0.21	-0.3
1,091,363	+		MPMX19_01051	0.21	-0.5
1,091,363	+		MPMX19_01051	0.21	-1.8
1,091,363	+		MPMX19_01051	0.21	-0.2
1,091,363	+		MPMX19_01051	0.21	+0.5
1,091,363	+		MPMX19_01051	0.21	+0.9
1,091,364	-		MPMX19_01051	0.21	+0.0
1,091,364	-		MPMX19_01051	0.21	-1.0
1,091,364	-		MPMX19_01051	0.21	+0.4
1,091,364	-		MPMX19_01051	0.21	-0.3
1,091,364	-		MPMX19_01051	0.21	-0.3
1,091,364	-		MPMX19_01051	0.21	+1.0
1,091,364	-		MPMX19_01051	0.21	-1.0
1,091,364	-		MPMX19_01051	0.21	-0.3
1,091,364	-		MPMX19_01051	0.21	-0.3
1,091,364	-		MPMX19_01051	0.21	-0.7
1,091,364	-		MPMX19_01051	0.21	-0.4
1,091,364	-		MPMX19_01051	0.21	+0.4
1,091,364	-		MPMX19_01051	0.21	+0.5
1,091,364	-		MPMX19_01051	0.21	-1.0
1,091,364	-		MPMX19_01051	0.21	-0.8
1,091,364	-		MPMX19_01051	0.21	-0.8
1,091,364	-		MPMX19_01051	0.21	-0.3
1,091,364	-		MPMX19_01051	0.21	+0.5
1,091,364	-		MPMX19_01051	0.21	+1.0
1,091,364	-		MPMX19_01051	0.21	+0.2
1,091,364	-		MPMX19_01051	0.21	-1.5
1,091,364	-		MPMX19_01051	0.21	+0.1
1,091,364	-		MPMX19_01051	0.21	+0.5
1,091,364	-		MPMX19_01051	0.21	-1.4
1,091,364	-		MPMX19_01051	0.21	+0.3
1,091,438	+		MPMX19_01051	0.25	-1.0
1,091,439	-		MPMX19_01051	0.25	-0.3
1,091,451	-		MPMX19_01051	0.25	+0.3
1,091,702	+		MPMX19_01051	0.38	-2.0
1,091,702	+		MPMX19_01051	0.38	-1.3
1,091,703	-		MPMX19_01051	0.38	-1.4
1,091,703	-		MPMX19_01051	0.38	+0.0
1,091,864	+		MPMX19_01051	0.46	-1.8
1,091,864	+		MPMX19_01051	0.46	+0.2
1,091,864	+		MPMX19_01051	0.46	+0.5
1,091,865	-		MPMX19_01051	0.46	+0.3
1,091,865	-		MPMX19_01051	0.46	-0.6
1,091,865	-		MPMX19_01051	0.46	-1.8
1,091,865	-		MPMX19_01051	0.46	-1.7
1,091,865	-		MPMX19_01051	0.46	-0.7
1,091,865	-		MPMX19_01051	0.46	-0.8
1,091,865	-		MPMX19_01051	0.46	-0.5
1,091,865	-		MPMX19_01051	0.46	-1.2
1,091,865	-		MPMX19_01051	0.46	-0.1
1,091,909	+		MPMX19_01051	0.49	-2.5
1,091,909	+		MPMX19_01051	0.49	-1.7
1,091,909	+		MPMX19_01051	0.49	+0.4
1,091,909	+		MPMX19_01051	0.49	-0.6
1,091,909	+		MPMX19_01051	0.49	-0.6
1,091,909	+		MPMX19_01051	0.49	-0.2
1,091,909	+		MPMX19_01051	0.49	-2.1
1,091,909	+		MPMX19_01051	0.49	-0.5
1,091,909	+		MPMX19_01051	0.49	-0.4
1,091,909	+		MPMX19_01051	0.49	+0.0
1,091,910	-		MPMX19_01051	0.49	+0.8
1,091,910	-		MPMX19_01051	0.49	-1.0
1,091,910	-		MPMX19_01051	0.49	+0.6
1,091,910	-		MPMX19_01051	0.49	-1.6
1,091,910	-		MPMX19_01051	0.49	-0.6
1,091,910	-		MPMX19_01051	0.49	-0.3
1,091,910	-		MPMX19_01051	0.49	-0.3