Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00976

Experiment: NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NL-CCM; Mixed culture; Sphingobium sp. WW5 2:1 starting OD to Azospirillum
1,014,988	+		MPMX19_00975	0.31	-1.0
1,014,988	+		MPMX19_00975	0.31	-0.6
1,014,988	+		MPMX19_00975	0.31	+0.6
1,014,988	+		MPMX19_00975	0.31	+1.0
1,014,988	+		MPMX19_00975	0.31	-1.7
1,014,988	+		MPMX19_00975	0.31	-0.7
1,014,988	+		MPMX19_00975	0.31	-0.2
1,014,988	+		MPMX19_00975	0.31	-0.5
1,014,988	+		MPMX19_00975	0.31	-0.7
1,014,988	+		MPMX19_00975	0.31	+1.1
1,014,989	-		MPMX19_00975	0.31	-0.8
1,014,989	-		MPMX19_00975	0.31	-0.2
1,014,989	-		MPMX19_00975	0.31	-1.5
1,014,989	-		MPMX19_00975	0.31	-0.2
1,014,989	-		MPMX19_00975	0.31	-0.6
1,014,989	-		MPMX19_00975	0.31	-2.5
1,014,989	-		MPMX19_00975	0.31	-2.1
1,014,989	-		MPMX19_00975	0.31	+0.4
1,014,989	-		MPMX19_00975	0.31	+1.0
1,015,207	+		MPMX19_00975	0.71	-0.1
1,015,208	-		MPMX19_00975	0.71	+0.2
1,015,208	-		MPMX19_00975	0.71	+0.4
1,015,456	+				-0.1
1,015,457	-				+0.0
1,015,457	-				-1.8
1,015,457	-				+0.3
1,015,488	+				+1.6
1,015,526	+				-0.4
1,015,526	+				-0.4
1,015,526	+				-0.7
1,015,526	+				-0.7
1,015,526	+				-0.6
1,015,526	+				-1.7
1,015,526	+				-2.0
1,015,526	+				-0.5
1,015,526	+				+0.3
1,015,536	+				-0.2
1,015,536	+				-0.7
1,015,536	+				-1.4
1,015,536	+				-1.5
1,015,536	+				-0.7
1,015,536	+				+1.1
1,015,536	+				+1.6
1,015,536	+				-1.1
1,015,536	+				-0.6
1,015,536	+				+0.8
1,015,537	-				+0.3
1,015,682	+				-1.7
1,015,682	+				-0.7
1,015,682	+				-0.3
1,015,682	+				-0.5
1,015,683	-				-2.5
1,015,683	-				-1.2
1,015,904	+		MPMX19_00976	0.18	-2.3
1,015,905	-		MPMX19_00976	0.18	+1.3
1,015,913	+		MPMX19_00976	0.18	-1.2
1,015,914	-		MPMX19_00976	0.18	-1.4
1,015,914	-		MPMX19_00976	0.18	-2.0
1,015,914	-		MPMX19_00976	0.18	-1.2
1,016,597	+		MPMX19_00976	0.62	+1.6
1,016,598	-		MPMX19_00976	0.62	+0.2
1,016,598	-		MPMX19_00976	0.62	-0.7
1,016,598	-		MPMX19_00976	0.62	-0.7
1,016,598	-		MPMX19_00976	0.62	+0.6
1,017,127	+				+0.5
1,017,127	+				-1.3
1,017,127	+				+0.2
1,017,127	+				-0.2
1,017,127	+				-2.0
1,017,128	-				-1.4
1,017,255	+		MPMX19_00977	0.19	-1.4
1,017,255	+		MPMX19_00977	0.19	-0.5
1,017,255	+		MPMX19_00977	0.19	-0.1
1,017,255	+		MPMX19_00977	0.19	-1.0
1,017,255	+		MPMX19_00977	0.19	-1.8
1,017,255	+		MPMX19_00977	0.19	+1.1
1,017,255	+		MPMX19_00977	0.19	-1.0
1,017,256	-		MPMX19_00977	0.19	+0.1
1,017,256	-		MPMX19_00977	0.19	+0.2
1,017,324	+		MPMX19_00977	0.47	-1.0
1,017,324	+		MPMX19_00977	0.47	-0.7
1,017,324	+		MPMX19_00977	0.47	-0.5
1,017,325	-		MPMX19_00977	0.47	-0.6
1,017,325	-		MPMX19_00977	0.47	+0.5
1,017,345	+		MPMX19_00977	0.56	+0.8
1,017,345	+		MPMX19_00977	0.56	-1.0
1,017,345	+		MPMX19_00977	0.56	-0.5
1,017,345	+		MPMX19_00977	0.56	-1.5
1,017,345	+		MPMX19_00977	0.56	-0.6
1,017,345	+		MPMX19_00977	0.56	-1.1
1,017,345	+		MPMX19_00977	0.56	-2.2
1,017,345	+		MPMX19_00977	0.56	-0.6
1,017,345	+		MPMX19_00977	0.56	-0.6
1,017,345	+		MPMX19_00977	0.56	-1.2
1,017,345	+		MPMX19_00977	0.56	+1.0
1,017,346	-		MPMX19_00977	0.56	-1.4
1,017,346	-		MPMX19_00977	0.56	+0.0
1,017,346	-		MPMX19_00977	0.56	+1.1
1,017,435	+				+0.4
1,017,435	+				-0.7
1,017,435	+				-0.3
1,017,435	+				-1.7
1,017,435	+				+0.4
1,017,435	+				-0.3
1,017,435	+				+0.1
1,017,436	-				+0.7
1,017,436	-				-1.5
1,017,450	+				-0.4
1,017,450	+				-0.1
1,017,450	+				-1.0
1,017,450	+				-2.0
1,017,450	+				-0.1
1,017,450	+				-1.2
1,017,451	-				-3.0
1,017,451	-				+0.4
1,017,451	-				-0.1
1,017,539	+				-0.2
1,017,539	+				+0.3
1,017,539	+				-0.3
1,017,539	+				-0.7
1,017,539	+				-0.1
1,017,539	+				+0.5
1,017,539	+				-0.7
1,017,540	-				-0.3
1,017,540	-				+0.1
1,017,540	-				-1.4
1,017,540	-				+0.1
1,017,540	-				-0.3
1,017,540	-				-1.1
1,017,540	-				-0.4
1,017,540	-				-0.9
1,017,617	+		MPMX19_00978	0.19	-0.3
1,017,695	+		MPMX19_00978	0.37	-1.0
1,017,695	+		MPMX19_00978	0.37	-0.5
1,017,696	-		MPMX19_00978	0.38	-1.4
1,017,696	-		MPMX19_00978	0.38	-0.4
1,017,696	-		MPMX19_00978	0.38	+1.2
1,017,696	-		MPMX19_00978	0.38	-0.5
1,017,696	-		MPMX19_00978	0.38	+0.0
1,017,696	-		MPMX19_00978	0.38	+0.9
1,017,828	-		MPMX19_00978	0.69	+0.5
1,017,828	-		MPMX19_00978	0.69	+0.2
1,018,095	+		MPMX19_00979	0.11	-0.9
1,018,095	+		MPMX19_00979	0.11	-0.5
1,018,095	+		MPMX19_00979	0.11	-0.5
1,018,095	+		MPMX19_00979	0.11	-0.8
1,018,095	+		MPMX19_00979	0.11	-0.6
1,018,095	+		MPMX19_00979	0.11	-0.8
1,018,095	+		MPMX19_00979	0.11	+1.1
1,018,095	+		MPMX19_00979	0.11	-0.0
1,018,095	+		MPMX19_00979	0.11	-2.3
1,018,095	+		MPMX19_00979	0.11	-0.2
1,018,095	+		MPMX19_00979	0.11	-0.8
1,018,095	+		MPMX19_00979	0.11	+0.0
1,018,095	+		MPMX19_00979	0.11	-0.1
1,018,095	+		MPMX19_00979	0.11	+0.2
1,018,095	+		MPMX19_00979	0.11	+0.2
1,018,095	+		MPMX19_00979	0.11	-1.9
1,018,096	-		MPMX19_00979	0.11	-0.4
1,018,096	-		MPMX19_00979	0.11	+2.1
1,018,096	-		MPMX19_00979	0.11	-0.7
1,018,096	-		MPMX19_00979	0.11	+0.3
1,018,096	-		MPMX19_00979	0.11	-0.7
1,018,096	-		MPMX19_00979	0.11	+0.9
1,018,096	-		MPMX19_00979	0.11	-0.5
1,018,096	-		MPMX19_00979	0.11	-0.8
1,018,096	-		MPMX19_00979	0.11	+0.4
1,018,096	-		MPMX19_00979	0.11	+0.0
1,018,096	-		MPMX19_00979	0.11	-1.7
1,018,096	-		MPMX19_00979	0.11	-1.3
1,018,096	-		MPMX19_00979	0.11	+0.1
1,018,096	-		MPMX19_00979	0.11	+0.9
1,018,096	-		MPMX19_00979	0.11	-0.8
1,018,096	-		MPMX19_00979	0.11	+0.3
1,018,096	-		MPMX19_00979	0.11	+0.4
1,018,096	-		MPMX19_00979	0.11	-1.3
1,018,096	-		MPMX19_00979	0.11	-0.8
1,018,096	-		MPMX19_00979	0.11	-0.3
1,018,096	-		MPMX19_00979	0.11	-0.7
1,018,096	-		MPMX19_00979	0.11	-1.9
1,018,096	-		MPMX19_00979	0.11	+0.8
1,018,096	-		MPMX19_00979	0.11	-0.3
1,018,105	+		MPMX19_00979	0.12	+0.2
1,018,105	+		MPMX19_00979	0.12	-0.8
1,018,105	+		MPMX19_00979	0.12	-1.0
1,018,105	+		MPMX19_00979	0.12	-1.7
1,018,105	+		MPMX19_00979	0.12	-0.5
1,018,105	+		MPMX19_00979	0.12	-0.4
1,018,105	+		MPMX19_00979	0.12	-0.7
1,018,105	+		MPMX19_00979	0.12	-1.5
1,018,105	+		MPMX19_00979	0.12	+0.3
1,018,106	-		MPMX19_00979	0.12	-1.0
1,018,106	-		MPMX19_00979	0.12	-0.3
1,018,106	-		MPMX19_00979	0.12	-1.5
1,018,106	-		MPMX19_00979	0.12	-1.8
1,018,106	-		MPMX19_00979	0.12	+0.3
1,018,106	-		MPMX19_00979	0.12	+0.4
1,018,106	-		MPMX19_00979	0.12	-0.4
1,018,106	-		MPMX19_00979	0.12	+0.1
1,018,106	-		MPMX19_00979	0.12	+0.3
1,018,107	+		MPMX19_00979	0.12	-1.8
1,018,107	+		MPMX19_00979	0.12	-1.7
1,018,107	+		MPMX19_00979	0.12	-0.5
1,018,107	+		MPMX19_00979	0.12	-0.7
1,018,107	+		MPMX19_00979	0.12	-1.3
1,018,107	+		MPMX19_00979	0.12	-2.6
1,018,107	+		MPMX19_00979	0.12	+0.1
1,018,107	+		MPMX19_00979	0.12	-0.4
1,018,107	+		MPMX19_00979	0.12	+1.6
1,018,107	+		MPMX19_00979	0.12	-1.7
1,018,107	+		MPMX19_00979	0.12	-0.4
1,018,107	+		MPMX19_00979	0.12	-1.2
1,018,107	+		MPMX19_00979	0.12	-0.4
1,018,108	-		MPMX19_00979	0.12	-1.5
1,018,108	-		MPMX19_00979	0.12	-2.1
1,018,108	-		MPMX19_00979	0.12	-0.2
1,018,108	-		MPMX19_00979	0.12	+0.2
1,018,108	-		MPMX19_00979	0.12	-0.4
1,018,108	-		MPMX19_00979	0.12	+0.3
1,018,108	-		MPMX19_00979	0.12	-0.6
1,018,108	-		MPMX19_00979	0.12	-0.7
1,018,108	-		MPMX19_00979	0.12	+0.1
1,018,108	-		MPMX19_00979	0.12	-1.2
1,018,108	-		MPMX19_00979	0.12	-0.2
1,018,108	-		MPMX19_00979	0.12	+0.3
1,018,108	-		MPMX19_00979	0.12	-0.3
1,018,108	-		MPMX19_00979	0.12	-1.7
1,018,108	-		MPMX19_00979	0.12	+0.6