Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04014

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
4,500,764	-		MIT1002_04013	0.52	-0.2
4,500,766	+		MIT1002_04013	0.52	+0.4
4,500,784	-		MIT1002_04013	0.53	+0.4
4,500,789	+		MIT1002_04013	0.53	+0.7
4,501,006	+		MIT1002_04013	0.65	+0.6
4,501,011	+		MIT1002_04013	0.66	+1.3
4,501,047	+		MIT1002_04013	0.68	+1.3
4,501,047	+		MIT1002_04013	0.68	-1.3
4,501,047	+		MIT1002_04013	0.68	+0.0
4,501,047	+		MIT1002_04013	0.68	+0.4
4,501,047	+		MIT1002_04013	0.68	-2.0
4,501,055	-		MIT1002_04013	0.68	-0.5
4,501,055	-		MIT1002_04013	0.68	-2.0
4,501,055	-		MIT1002_04013	0.68	+1.6
4,501,055	-		MIT1002_04013	0.68	+1.0
4,501,055	-		MIT1002_04013	0.68	-0.0
4,501,167	+		MIT1002_04013	0.75	-0.7
4,501,177	+		MIT1002_04013	0.75	-2.1
4,501,185	-		MIT1002_04013	0.76	+1.1
4,501,185	-		MIT1002_04013	0.76	+0.4
4,501,185	-		MIT1002_04013	0.76	+0.3
4,501,187	+		MIT1002_04013	0.76	+0.5
4,501,187	+		MIT1002_04013	0.76	-1.4
4,501,187	+		MIT1002_04013	0.76	-0.3
4,501,195	-		MIT1002_04013	0.76	+0.6
4,501,219	-		MIT1002_04013	0.77	+0.3
4,501,219	-		MIT1002_04013	0.77	-0.2
4,501,481	+				-0.3
4,501,499	-				-1.8
4,501,511	+				+1.8
4,501,514	-				+2.6
4,501,529	-				+0.2
4,501,529	-				+0.9
4,501,605	+				+0.1
4,501,608	-				-0.8
4,501,689	-				-0.9
4,501,692	+				+0.2
4,501,699	-				+2.5
4,501,767	-				-0.8
4,501,781	-				+1.4
4,501,827	+				+0.0
4,501,827	+				-0.1
4,501,835	-		MIT1002_04014	0.10	+1.9
4,501,857	-		MIT1002_04014	0.13	+1.2
4,501,933	+		MIT1002_04014	0.21	+1.3
4,501,943	+		MIT1002_04014	0.22	-1.9
4,501,943	+		MIT1002_04014	0.22	-1.8
4,501,974	+		MIT1002_04014	0.25	+1.1
4,501,977	-		MIT1002_04014	0.26	-1.8
4,502,014	-		MIT1002_04014	0.30	+0.7
4,502,166	+		MIT1002_04014	0.46	-0.1
4,502,187	+		MIT1002_04014	0.49	+0.3
4,502,195	-		MIT1002_04014	0.49	-0.6
4,502,211	+		MIT1002_04014	0.51	-0.0
4,502,229	-		MIT1002_04014	0.53	-1.6
4,502,348	-		MIT1002_04014	0.66	+0.4
4,502,481	+		MIT1002_04014	0.81	-1.8
4,502,520	-		MIT1002_04014	0.85	+2.2
4,502,564	+		MIT1002_04014	0.90	+0.1
4,502,572	-				-0.2
4,502,600	+				-0.9
4,502,600	+				+0.6
4,502,600	+				-0.9
4,502,608	-				-1.4
4,502,630	-				+0.9
4,502,674	-				+2.8
4,502,736	+		MIT1002_04015	0.20	-1.6
4,502,736	+		MIT1002_04015	0.20	-0.3
4,502,736	+		MIT1002_04015	0.20	+2.1
4,502,744	-		MIT1002_04015	0.22	-0.6
4,502,753	+		MIT1002_04015	0.25	-0.9
4,502,847	+		MIT1002_04015	0.55	+0.1
4,502,945	-		MIT1002_04015	0.86	+1.0
4,502,969	-				+0.7
4,502,983	-				-0.4
4,503,012	-				-1.8
4,503,162	+				+0.3
4,503,185	+				+0.6
4,503,277	+		MIT1002_04016	0.13	+1.9
4,503,285	-		MIT1002_04016	0.14	+1.2
4,503,285	-		MIT1002_04016	0.14	-1.0
4,503,311	+		MIT1002_04016	0.18	-0.7
4,503,326	+		MIT1002_04016	0.20	+2.0
4,503,334	-		MIT1002_04016	0.20	-1.0
4,503,334	-		MIT1002_04016	0.20	-0.8
4,503,334	-		MIT1002_04016	0.20	-0.8
4,503,353	+		MIT1002_04016	0.23	-0.0
4,503,353	+		MIT1002_04016	0.23	+0.6
4,503,353	+		MIT1002_04016	0.23	-0.5
4,503,361	-		MIT1002_04016	0.24	-0.4
4,503,361	-		MIT1002_04016	0.24	-0.3
4,503,582	+		MIT1002_04016	0.51	+0.7