Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03837

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
4,291,099	+		MIT1002_03836	0.66	+2.0
4,291,121	-		MIT1002_03836	0.67	-0.5
4,291,126	-		MIT1002_03836	0.67	+0.4
4,291,133	+		MIT1002_03836	0.68	-2.2
4,291,150	+		MIT1002_03836	0.68	+0.6
4,291,150	+		MIT1002_03836	0.68	+1.3
4,291,150	+		MIT1002_03836	0.68	+0.0
4,291,162	-		MIT1002_03836	0.69	-0.9
4,291,165	+		MIT1002_03836	0.69	-0.8
4,291,176	-		MIT1002_03836	0.69	+0.9
4,291,176	-		MIT1002_03836	0.69	-1.0
4,291,248	-		MIT1002_03836	0.72	-0.8
4,291,314	-		MIT1002_03836	0.74	+0.7
4,291,315	-		MIT1002_03836	0.74	-1.3
4,291,322	-		MIT1002_03836	0.75	+0.2
4,291,381	+		MIT1002_03836	0.77	-1.5
4,291,430	-		MIT1002_03836	0.79	+1.7
4,291,442	-		MIT1002_03836	0.79	-0.7
4,291,454	-		MIT1002_03836	0.79	-1.6
4,291,547	-		MIT1002_03836	0.83	-0.6
4,291,633	+		MIT1002_03836	0.86	-0.1
4,291,700	+		MIT1002_03836	0.89	-0.3
4,291,735	+				+1.0
4,291,753	+				-2.0
4,291,769	-				-1.9
4,291,791	-				-0.1
4,291,792	-				+1.7
4,291,798	-				-0.5
4,291,825	+				-0.7
4,291,842	-				+1.4
4,291,842	-				+0.8
4,291,886	-				+0.1
4,291,897	-				+0.9
4,291,899	+				-1.1
4,291,907	-				-1.2
4,291,907	-				-1.0
4,291,913	-				-0.7
4,291,925	-				-0.9
4,291,949	-				+0.6
4,291,950	-				-0.0
4,292,017	+				+0.1
4,292,107	+				-0.1
4,292,116	-				+0.0
4,292,128	+				-2.3
4,292,128	+				+1.1
4,292,134	+				-0.8
4,292,176	+				+0.0
4,292,178	-				-0.5
4,292,266	+				-0.1
4,292,266	+				-1.8
4,292,266	+				+0.1
4,292,274	-				+0.0
4,292,354	-				+0.1
4,292,354	-				+1.0
4,292,454	+		MIT1002_03837	0.13	+0.7
4,292,483	+		MIT1002_03837	0.14	-1.5
4,292,520	-		MIT1002_03837	0.15	+1.1
4,292,565	-		MIT1002_03837	0.17	-0.3
4,292,570	+		MIT1002_03837	0.17	+0.5
4,292,601	+		MIT1002_03837	0.18	-0.5
4,292,603	+		MIT1002_03837	0.18	-0.7
4,292,685	+		MIT1002_03837	0.21	+0.3
4,292,800	+		MIT1002_03837	0.25	-1.0
4,292,872	+		MIT1002_03837	0.27	+0.9
4,292,979	-		MIT1002_03837	0.31	+1.0
4,292,983	+		MIT1002_03837	0.31	+1.1
4,293,005	+		MIT1002_03837	0.32	+2.2
4,293,086	+		MIT1002_03837	0.34	+1.0
4,293,087	-		MIT1002_03837	0.35	-2.3
4,293,131	+		MIT1002_03837	0.36	+0.1
4,293,166	+		MIT1002_03837	0.37	+0.3
4,293,171	+		MIT1002_03837	0.37	+1.4
4,293,174	-		MIT1002_03837	0.37	-0.5
4,293,178	+		MIT1002_03837	0.38	-0.8
4,293,179	-		MIT1002_03837	0.38	+0.0
4,293,179	-		MIT1002_03837	0.38	+0.0
4,293,189	-		MIT1002_03837	0.38	-0.5
4,293,189	-		MIT1002_03837	0.38	+0.6
4,293,258	+		MIT1002_03837	0.40	-0.6
4,293,285	-		MIT1002_03837	0.41	+0.4
4,293,289	+		MIT1002_03837	0.41	-0.2
4,293,289	+		MIT1002_03837	0.41	-0.5
4,293,297	-		MIT1002_03837	0.42	-0.4
4,293,328	-		MIT1002_03837	0.43	+1.1
4,293,359	+		MIT1002_03837	0.44	+0.8
4,293,470	+		MIT1002_03837	0.48	+0.2
4,293,478	-		MIT1002_03837	0.48	+1.6
4,293,480	+		MIT1002_03837	0.48	+1.0
4,293,480	+		MIT1002_03837	0.48	-0.2
4,293,497	+		MIT1002_03837	0.48	+0.3
4,293,518	+		MIT1002_03837	0.49	-0.5
4,293,521	-		MIT1002_03837	0.49	+1.1
4,293,523	+		MIT1002_03837	0.49	+2.8
4,293,526	-		MIT1002_03837	0.49	+1.0
4,293,544	+		MIT1002_03837	0.50	-1.0
4,293,552	-		MIT1002_03837	0.50	+2.0
4,293,552	-		MIT1002_03837	0.50	-1.9
4,293,566	+		MIT1002_03837	0.51	-0.7
4,293,587	-		MIT1002_03837	0.51	+0.0
4,293,637	+		MIT1002_03837	0.53	-1.1
4,293,643	-		MIT1002_03837	0.53	+0.2
4,293,692	+		MIT1002_03837	0.55	-2.1
4,293,700	-		MIT1002_03837	0.55	-1.2
4,293,700	-		MIT1002_03837	0.55	+0.4
4,293,700	-		MIT1002_03837	0.55	-0.2
4,293,778	-		MIT1002_03837	0.58	-0.2
4,293,785	+		MIT1002_03837	0.58	+0.4
4,293,799	-		MIT1002_03837	0.59	+0.0
4,293,855	+		MIT1002_03837	0.61	-0.2
4,293,924	+		MIT1002_03837	0.63	+0.8
4,293,952	-		MIT1002_03837	0.64	-1.6
4,293,993	-		MIT1002_03837	0.65	+1.0
4,294,003	-		MIT1002_03837	0.66	+1.4
4,294,148	-		MIT1002_03837	0.71	-0.1
4,294,233	+		MIT1002_03837	0.73	-0.3
4,294,237	-		MIT1002_03837	0.74	+0.2
4,294,267	+		MIT1002_03837	0.75	+0.2
4,294,276	-		MIT1002_03837	0.75	-2.2
4,294,305	+		MIT1002_03837	0.76	-2.1
4,294,351	-		MIT1002_03837	0.77	-0.2
4,294,351	-		MIT1002_03837	0.77	+0.1
4,294,366	+		MIT1002_03837	0.78	-1.4
4,294,397	-		MIT1002_03837	0.79	+1.8
4,294,422	+		MIT1002_03837	0.80	+0.0
4,294,460	+		MIT1002_03837	0.81	-0.2
4,294,468	-		MIT1002_03837	0.81	+0.4
4,294,468	-		MIT1002_03837	0.81	-0.9
4,294,470	+		MIT1002_03837	0.81	+1.4
4,294,470	+		MIT1002_03837	0.81	+0.4
4,294,497	-		MIT1002_03837	0.82	-0.1
4,294,497	-		MIT1002_03837	0.82	+0.1
4,294,522	+		MIT1002_03837	0.83	-0.3
4,294,525	+		MIT1002_03837	0.83	+0.0
4,294,525	+		MIT1002_03837	0.83	-0.3
4,294,532	+		MIT1002_03837	0.84	-1.1
4,294,567	+		MIT1002_03837	0.85	+0.3
4,294,567	+		MIT1002_03837	0.85	-0.9
4,294,567	+		MIT1002_03837	0.85	-1.4
4,294,624	+		MIT1002_03837	0.87	+1.6
4,294,635	+		MIT1002_03837	0.87	-1.7
4,294,668	-		MIT1002_03837	0.88	+0.7
4,294,776	-				+0.5
4,294,787	-				-1.0
4,294,794	-				-0.1
4,294,845	-				+1.3
4,294,850	-				-0.9
4,294,880	-				+0.0
4,294,903	-				+0.7
4,294,916	+				+0.6
4,294,981	-				+0.4
4,295,023	-				+0.2
4,295,050	-				+2.7
4,295,077	-				+0.9
4,295,120	+				+0.5
4,295,128	-				+0.2
4,295,128	-				+0.6
4,295,160	-				-1.4
4,295,166	+				-0.4
4,295,262	+				+1.6
4,295,276	+				+0.4
4,295,276	+				+0.3
4,295,284	-				-0.1
4,295,299	-				+0.7
4,295,328	+				+0.8
4,295,334	-				-0.4
4,295,344	+		MIT1002_03838	0.10	+0.3
4,295,352	-		MIT1002_03838	0.11	+0.1
4,295,377	+		MIT1002_03838	0.12	-0.2
4,295,397	+		MIT1002_03838	0.13	-1.3
4,295,405	-		MIT1002_03838	0.13	-2.2
4,295,473	-		MIT1002_03838	0.17	-1.0
4,295,479	+		MIT1002_03838	0.17	+1.0
4,295,487	-		MIT1002_03838	0.18	+0.9
4,295,487	-		MIT1002_03838	0.18	+0.4
4,295,487	-		MIT1002_03838	0.18	-0.4
4,295,515	+		MIT1002_03838	0.19	-0.6
4,295,525	+		MIT1002_03838	0.20	-0.3
4,295,533	-		MIT1002_03838	0.20	-0.4
4,295,536	+		MIT1002_03838	0.20	+0.8
4,295,542	-		MIT1002_03838	0.21	-1.4
4,295,542	-		MIT1002_03838	0.21	+1.5
4,295,576	-		MIT1002_03838	0.23	+1.1
4,295,622	+		MIT1002_03838	0.25	-2.1
4,295,622	+		MIT1002_03838	0.25	-0.7
4,295,632	+		MIT1002_03838	0.25	+0.5
4,295,641	-		MIT1002_03838	0.26	-0.7
4,295,690	+		MIT1002_03838	0.29	+1.1
4,295,702	+		MIT1002_03838	0.29	-2.5
4,295,750	-		MIT1002_03838	0.32	+0.8
4,295,820	-		MIT1002_03838	0.35	+2.1
4,295,845	+		MIT1002_03838	0.37	-0.4
4,295,875	-		MIT1002_03838	0.38	-1.5
4,295,883	-		MIT1002_03838	0.39	+1.0
4,295,896	+		MIT1002_03838	0.39	+0.4
4,296,003	-		MIT1002_03838	0.45	-3.5