Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03781

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
4,225,837	+		MIT1002_03780	0.52	-0.5
4,225,837	+		MIT1002_03780	0.52	+0.1
4,225,837	+		MIT1002_03780	0.52	-1.8
4,225,837	+		MIT1002_03780	0.52	+1.8
4,225,837	+		MIT1002_03780	0.52	-0.8
4,225,837	+		MIT1002_03780	0.52	-1.6
4,225,837	+		MIT1002_03780	0.52	+1.7
4,225,837	+		MIT1002_03780	0.52	-1.8
4,225,837	+		MIT1002_03780	0.52	-0.3
4,225,837	+		MIT1002_03780	0.52	-1.3
4,225,837	+		MIT1002_03780	0.52	-2.3
4,225,837	+		MIT1002_03780	0.52	-1.2
4,225,837	+		MIT1002_03780	0.52	+0.5
4,225,845	-		MIT1002_03780	0.53	-0.9
4,225,845	-		MIT1002_03780	0.53	+2.8
4,225,845	-		MIT1002_03780	0.53	+1.0
4,225,845	-		MIT1002_03780	0.53	+1.0
4,225,845	-		MIT1002_03780	0.53	-1.1
4,225,845	-		MIT1002_03780	0.53	-0.0
4,225,845	-		MIT1002_03780	0.53	+1.3
4,225,845	-		MIT1002_03780	0.53	+1.0
4,225,860	+		MIT1002_03780	0.54	+0.9
4,225,860	+		MIT1002_03780	0.54	+0.5
4,225,864	-		MIT1002_03780	0.54	-0.5
4,225,868	-		MIT1002_03780	0.54	+0.5
4,225,870	+		MIT1002_03780	0.54	+0.4
4,225,878	-		MIT1002_03780	0.55	+0.8
4,225,878	-		MIT1002_03780	0.55	-0.1
4,225,887	-		MIT1002_03780	0.55	-0.8
4,226,042	-		MIT1002_03780	0.65	+1.5
4,226,052	-		MIT1002_03780	0.66	-0.5
4,226,084	-		MIT1002_03780	0.67	-0.8
4,226,098	-		MIT1002_03780	0.68	+0.5
4,226,120	+		MIT1002_03780	0.70	+0.5
4,226,120	+		MIT1002_03780	0.70	-1.9
4,226,128	-		MIT1002_03780	0.70	-1.5
4,226,128	-		MIT1002_03780	0.70	+0.5
4,226,128	-		MIT1002_03780	0.70	+1.2
4,226,128	-		MIT1002_03780	0.70	+0.7
4,226,174	+		MIT1002_03780	0.73	+0.0
4,226,214	-		MIT1002_03780	0.75	-0.8
4,226,216	-		MIT1002_03780	0.76	+1.0
4,226,237	-		MIT1002_03780	0.77	-2.6
4,226,272	-		MIT1002_03780	0.79	+1.2
4,226,295	-		MIT1002_03780	0.80	-0.4
4,226,307	+		MIT1002_03780	0.81	-0.4
4,226,328	-		MIT1002_03780	0.82	-2.0
4,226,347	+		MIT1002_03780	0.83	-2.7
4,226,350	-		MIT1002_03780	0.84	-0.3
4,226,428	-		MIT1002_03780	0.88	+1.0
4,226,497	+				+0.7
4,226,505	-				+0.8
4,226,566	+				+1.3
4,226,575	-				-1.1
4,226,676	+				-0.9
4,226,693	+				+0.2
4,226,693	+				+0.0
4,226,701	-				-0.3
4,226,701	-				+0.5
4,226,854	+				+0.9
4,226,854	+				+0.6
4,226,854	+				-0.5
4,226,861	+		MIT1002_03781	0.10	-0.0
4,226,861	+		MIT1002_03781	0.10	-0.1
4,226,862	-		MIT1002_03781	0.11	+0.9
4,226,864	-		MIT1002_03781	0.11	-2.0
4,226,988	-		MIT1002_03781	0.25	+0.4
4,226,988	-		MIT1002_03781	0.25	-0.4
4,227,096	-		MIT1002_03781	0.37	-1.1
4,227,096	-		MIT1002_03781	0.37	+1.9
4,227,231	+		MIT1002_03781	0.52	-0.2
4,227,246	-		MIT1002_03781	0.54	-0.4
4,227,306	-		MIT1002_03781	0.61	-0.4
4,227,306	-		MIT1002_03781	0.61	-1.1
4,227,355	+		MIT1002_03781	0.66	+0.8
4,227,362	+		MIT1002_03781	0.67	-3.7
4,227,362	+		MIT1002_03781	0.67	-2.4
4,227,370	-		MIT1002_03781	0.68	-0.3
4,227,375	-		MIT1002_03781	0.68	-0.8
4,227,380	-		MIT1002_03781	0.69	-0.2
4,227,507	+		MIT1002_03781	0.83	+0.5
4,227,616	+				-0.5
4,227,662	+				-0.6
4,227,705	+				-1.2
4,227,720	-				-1.2
4,227,735	+				+0.3
4,227,735	+				+0.2
4,227,743	-				+1.0
4,227,743	-				-3.8
4,227,743	-				+1.2
4,227,836	-				+0.5
4,227,841	-		MIT1002_03782	0.11	-1.9
4,228,078	-		MIT1002_03782	0.70	-0.4
4,228,275	-				-1.8
4,228,304	-				-1.1
4,228,315	+				+0.0
4,228,315	+				+0.3
4,228,315	+				-1.6
4,228,315	+				-0.8
4,228,323	-				-2.4
4,228,323	-				-0.4
4,228,323	-				-2.7
4,228,323	-				-1.3
4,228,323	-				-0.1
4,228,347	+				-0.6
4,228,355	-				-0.9