Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03615

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
4,037,592	+		MIT1002_03613	0.59	+0.9
4,037,598	-		MIT1002_03613	0.60	+1.3
4,037,600	-		MIT1002_03613	0.60	-0.6
4,037,600	-		MIT1002_03613	0.60	-1.9
4,037,600	-		MIT1002_03613	0.60	+0.5
4,037,621	+		MIT1002_03613	0.63	-0.6
4,037,653	-		MIT1002_03613	0.68	+3.3
4,037,671	-		MIT1002_03613	0.71	-2.1
4,037,699	+		MIT1002_03613	0.75	-0.6
4,037,758	-		MIT1002_03613	0.84	-0.5
4,037,758	-		MIT1002_03613	0.84	-0.1
4,037,758	-		MIT1002_03613	0.84	-2.1
4,037,783	+		MIT1002_03613	0.88	+0.2
4,037,836	-				-1.0
4,037,840	+				+1.5
4,037,885	+				+1.7
4,037,962	+				-0.4
4,037,997	-				+0.1
4,038,007	+				-0.0
4,038,007	+				-0.7
4,038,015	-				+2.5
4,038,080	-		MIT1002_03614	0.17	-0.3
4,038,095	+		MIT1002_03614	0.23	-2.2
4,038,138	+		MIT1002_03614	0.40	+1.4
4,038,174	-		MIT1002_03614	0.55	-1.7
4,038,188	-		MIT1002_03614	0.60	-1.5
4,038,285	+				+0.3
4,038,285	+				+0.3
4,038,288	-				+2.0
4,038,293	-				-0.4
4,038,316	-				+1.0
4,038,317	+				-0.7
4,038,317	+				+1.0
4,038,317	+				-0.3
4,038,318	+				+2.3
4,038,336	+				-0.1
4,038,338	+				+2.4
4,038,344	-				-1.0
4,038,344	-				-2.4
4,038,359	-				-1.1
4,038,364	-				-0.2
4,038,382	-				+0.7
4,038,389	+				+1.3
4,038,389	+				-1.5
4,038,389	+				-1.3
4,038,389	+				-1.0
4,038,397	-				-2.1
4,038,434	+				-1.3
4,038,497	+				-2.0
4,038,502	+				-0.2
4,038,503	-				-0.7
4,038,516	+				-3.4
4,038,568	+				-0.8
4,040,032	+				+1.1
4,040,040	-				-1.0
4,040,132	+				-0.2
4,040,132	+				-1.2
4,040,132	+				+0.9
4,040,132	+				-1.0
4,040,140	-				-1.0
4,040,142	+				-0.5
4,040,142	+				-4.5
4,040,170	-				-0.5
4,040,232	+		MIT1002_03616	0.12	-2.4
4,040,245	-		MIT1002_03616	0.14	-0.7
4,040,339	-		MIT1002_03616	0.27	-3.9
4,040,344	+		MIT1002_03616	0.28	-0.6
4,040,349	+		MIT1002_03616	0.29	-0.8
4,040,376	+		MIT1002_03616	0.33	+0.4
4,040,384	-		MIT1002_03616	0.34	-2.4
4,040,454	-		MIT1002_03616	0.44	-2.3
4,040,454	-		MIT1002_03616	0.44	-2.1
4,040,508	-		MIT1002_03616	0.52	-3.0
4,040,517	+		MIT1002_03616	0.53	+0.7
4,040,572	+		MIT1002_03616	0.61	+0.4
4,040,735	+		MIT1002_03616	0.84	-1.2
4,040,849	+				-2.1
4,040,850	+				+0.8
4,040,923	+				+1.3
4,040,974	+				-2.0
4,040,982	-				+0.8
4,040,992	-				+1.3