Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03540

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,956,046	+				-0.2
3,956,084	-				+1.4
3,956,084	-				-0.5
3,956,207	-		MIT1002_03539	0.17	-2.2
3,956,871	+		MIT1002_03539	0.84	-1.7
3,956,897	+		MIT1002_03539	0.87	-3.2
3,956,947	+				-0.0
3,956,957	+				-2.0
3,958,262	+				-0.9
3,958,262	+				-2.6
3,958,439	+		MIT1002_03541	0.14	+0.8
3,958,692	-		MIT1002_03541	0.30	-2.5
3,958,717	+		MIT1002_03541	0.31	+0.0
3,958,725	-		MIT1002_03541	0.32	-0.7
3,958,725	-		MIT1002_03541	0.32	-0.6
3,958,725	-		MIT1002_03541	0.32	-2.0
3,958,725	-		MIT1002_03541	0.32	-3.4
3,958,754	+		MIT1002_03541	0.34	-0.3
3,958,762	-		MIT1002_03541	0.34	-1.4
3,958,825	+		MIT1002_03541	0.38	+0.8
3,958,873	+		MIT1002_03541	0.41	-1.8
3,958,961	-		MIT1002_03541	0.47	-0.0
3,959,018	-		MIT1002_03541	0.51	+0.3
3,959,023	-		MIT1002_03541	0.51	-1.4