Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03517

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,930,159	+		MIT1002_03516	0.62	-5.4
3,930,167	-		MIT1002_03516	0.62	-3.6
3,930,177	-		MIT1002_03516	0.62	-3.9
3,930,201	+		MIT1002_03516	0.64	-2.3
3,930,205	-		MIT1002_03516	0.64	-2.9
3,930,226	-		MIT1002_03516	0.65	-3.3
3,930,346	+		MIT1002_03516	0.71	-2.1
3,930,455	+		MIT1002_03516	0.77	-2.7
3,930,463	-		MIT1002_03516	0.77	-4.5
3,930,464	+		MIT1002_03516	0.77	-2.8
3,930,472	-		MIT1002_03516	0.78	-0.3
3,930,559	+		MIT1002_03516	0.82	-1.5
3,930,776	+				-4.2
3,930,777	+				+0.4
3,930,797	-				+0.4
3,930,797	-				-0.6
3,930,797	-				-1.9
3,930,797	-				-2.0
3,930,797	-				-0.8
3,930,797	-				-1.3
3,930,797	-				-2.1
3,930,797	-				-2.4
3,930,798	+				-2.1
3,930,816	-				+0.7
3,930,856	-				-2.4
3,931,004	-				-2.0
3,931,011	+				-0.6
3,931,042	+				-1.2
3,931,042	+				-2.0
3,931,184	+				+0.2
3,931,194	+				-0.5
3,931,202	-				+0.8
3,931,308	-		MIT1002_03517	0.13	-1.2
3,931,308	-		MIT1002_03517	0.13	+0.3
3,931,398	+		MIT1002_03517	0.21	-0.0
3,931,398	+		MIT1002_03517	0.21	+1.3
3,931,398	+		MIT1002_03517	0.21	-0.6
3,931,398	+		MIT1002_03517	0.21	-0.1
3,931,406	-		MIT1002_03517	0.22	+0.7
3,931,406	-		MIT1002_03517	0.22	+0.2
3,931,518	+		MIT1002_03517	0.31	-0.3
3,931,518	+		MIT1002_03517	0.31	-0.6
3,931,518	+		MIT1002_03517	0.31	-0.1
3,931,518	+		MIT1002_03517	0.31	-0.9
3,931,518	+		MIT1002_03517	0.31	-3.0
3,931,518	+		MIT1002_03517	0.31	-1.9
3,931,518	+		MIT1002_03517	0.31	-0.6
3,931,518	+		MIT1002_03517	0.31	-2.4
3,931,518	+		MIT1002_03517	0.31	-0.9
3,931,518	+		MIT1002_03517	0.31	-0.7
3,931,518	+		MIT1002_03517	0.31	-0.1
3,931,518	+		MIT1002_03517	0.31	-1.3
3,931,518	+		MIT1002_03517	0.31	+0.9
3,931,518	+		MIT1002_03517	0.31	-0.7
3,931,518	+		MIT1002_03517	0.31	+0.2
3,931,518	+		MIT1002_03517	0.31	-0.9
3,931,518	+		MIT1002_03517	0.31	-0.3
3,931,518	+		MIT1002_03517	0.31	-1.9
3,931,526	-		MIT1002_03517	0.32	-1.1
3,931,526	-		MIT1002_03517	0.32	-1.6
3,931,526	-		MIT1002_03517	0.32	-1.0
3,931,526	-		MIT1002_03517	0.32	-0.2
3,931,526	-		MIT1002_03517	0.32	-0.6
3,931,526	-		MIT1002_03517	0.32	-1.9
3,931,526	-		MIT1002_03517	0.32	-2.6
3,931,526	-		MIT1002_03517	0.32	+0.7
3,931,526	-		MIT1002_03517	0.32	-0.5
3,931,526	-		MIT1002_03517	0.32	-0.1
3,931,526	-		MIT1002_03517	0.32	-0.2
3,931,526	-		MIT1002_03517	0.32	-2.5
3,931,526	-		MIT1002_03517	0.32	+3.0
3,931,526	-		MIT1002_03517	0.32	-1.2
3,931,526	-		MIT1002_03517	0.32	+2.3
3,931,560	+		MIT1002_03517	0.35	-0.8
3,931,588	+		MIT1002_03517	0.37	+0.8
3,931,596	-		MIT1002_03517	0.38	-0.7
3,931,659	-		MIT1002_03517	0.43	-0.5
3,931,666	+		MIT1002_03517	0.44	-0.6
3,931,666	+		MIT1002_03517	0.44	-0.9
3,931,683	-		MIT1002_03517	0.46	-0.5
3,931,732	-		MIT1002_03517	0.50	-1.9
3,931,742	-		MIT1002_03517	0.51	+3.6
3,931,770	-		MIT1002_03517	0.53	-0.3
3,931,782	-		MIT1002_03517	0.54	-2.8
3,931,800	-		MIT1002_03517	0.56	+0.0
3,931,892	+		MIT1002_03517	0.63	-1.1
3,931,910	-		MIT1002_03517	0.65	+1.0
3,931,969	+		MIT1002_03517	0.70	-0.9
3,931,970	-		MIT1002_03517	0.70	+0.4
3,931,970	-		MIT1002_03517	0.70	+0.4
3,931,977	-		MIT1002_03517	0.71	-0.5
3,932,006	+		MIT1002_03517	0.73	+0.2
3,932,006	+		MIT1002_03517	0.73	+1.0
3,932,006	+		MIT1002_03517	0.73	-0.3
3,932,014	-		MIT1002_03517	0.74	-0.2
3,932,014	-		MIT1002_03517	0.74	-1.9
3,932,014	-		MIT1002_03517	0.74	-1.2
3,932,014	-		MIT1002_03517	0.74	-2.0
3,932,014	-		MIT1002_03517	0.74	-1.3
3,932,014	-		MIT1002_03517	0.74	+1.6
3,932,053	+		MIT1002_03517	0.77	-2.7
3,932,061	-		MIT1002_03517	0.78	+0.4
3,932,099	+		MIT1002_03517	0.81	-0.5
3,932,118	+		MIT1002_03517	0.83	-2.9
3,932,149	+		MIT1002_03517	0.86	-0.6
3,932,182	+		MIT1002_03517	0.88	-2.0
3,932,225	+				-0.3
3,932,346	+				+0.4
3,932,359	-				-0.2
3,932,364	-				+0.2
3,932,408	+				-1.0
3,932,411	+				+0.6
3,932,424	-				+0.8
3,932,637	+		MIT1002_03518	0.20	-1.2
3,932,637	+		MIT1002_03518	0.20	+0.1
3,932,640	-		MIT1002_03518	0.20	-1.5
3,932,645	-		MIT1002_03518	0.20	+0.5
3,932,671	+		MIT1002_03518	0.23	-1.0
3,932,738	-		MIT1002_03518	0.28	+1.0
3,932,758	-		MIT1002_03518	0.30	-1.1
3,932,767	+		MIT1002_03518	0.31	+0.6
3,932,798	+		MIT1002_03518	0.34	+2.1
3,932,803	+		MIT1002_03518	0.34	+0.5
3,932,803	+		MIT1002_03518	0.34	+0.3
3,932,811	+		MIT1002_03518	0.35	+0.2
3,932,811	-		MIT1002_03518	0.35	+0.8
3,932,811	-		MIT1002_03518	0.35	-1.5
3,932,853	-		MIT1002_03518	0.38	-1.0
3,932,861	+		MIT1002_03518	0.39	-0.3
3,932,861	+		MIT1002_03518	0.39	-0.1
3,932,869	-		MIT1002_03518	0.40	-1.3
3,932,987	-		MIT1002_03518	0.50	-2.4
3,933,033	+		MIT1002_03518	0.54	-0.4
3,933,039	+		MIT1002_03518	0.55	-0.7
3,933,047	-		MIT1002_03518	0.55	+1.1
3,933,049	+		MIT1002_03518	0.55	-0.2
3,933,049	+		MIT1002_03518	0.55	-0.5
3,933,057	-		MIT1002_03518	0.56	-1.3
3,933,076	+		MIT1002_03518	0.58	-0.2
3,933,213	+		MIT1002_03518	0.70	-0.2
3,933,214	+		MIT1002_03518	0.70	+1.1
3,933,216	-		MIT1002_03518	0.70	-0.2
3,933,224	+		MIT1002_03518	0.71	-1.7
3,933,232	-		MIT1002_03518	0.71	-0.7
3,933,238	-		MIT1002_03518	0.72	-0.7
3,933,255	-		MIT1002_03518	0.73	+1.1
3,933,274	+		MIT1002_03518	0.75	+1.0