Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03378

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,779,035	-				+0.5
3,779,045	-				+0.8
3,779,104	+				+0.3
3,779,146	+				+1.2
3,779,156	+				-0.4
3,779,163	+				+0.0
3,779,164	-				-0.3
3,779,171	-				-0.9
3,779,171	-				+0.6
3,779,259	+		MIT1002_03377	0.18	-1.0
3,779,259	+		MIT1002_03377	0.18	-0.9
3,779,261	+		MIT1002_03377	0.19	-0.1
3,779,270	+		MIT1002_03377	0.20	-0.8
3,779,278	-		MIT1002_03377	0.20	-0.8
3,779,355	+		MIT1002_03377	0.29	-0.7
3,779,365	+		MIT1002_03377	0.30	-0.2
3,779,373	-		MIT1002_03377	0.31	-1.8
3,779,423	-		MIT1002_03377	0.36	+1.0
3,779,581	-		MIT1002_03377	0.54	+0.3
3,779,699	-		MIT1002_03377	0.67	-0.7
3,779,730	+		MIT1002_03377	0.70	-0.8
3,779,733	-		MIT1002_03377	0.71	-0.6
3,779,733	-		MIT1002_03377	0.71	+0.4
3,779,738	-		MIT1002_03377	0.71	+0.9
3,779,738	-		MIT1002_03377	0.71	-0.7
3,779,740	+		MIT1002_03377	0.71	+1.0
3,779,740	+		MIT1002_03377	0.71	-3.4
3,779,740	+		MIT1002_03377	0.71	-1.6
3,779,740	+		MIT1002_03377	0.71	-0.5
3,779,748	-		MIT1002_03377	0.72	+0.7
3,779,800	-		MIT1002_03377	0.78	-0.8
3,779,800	-		MIT1002_03377	0.78	+1.1
3,779,802	-		MIT1002_03377	0.78	-1.4
3,779,810	-		MIT1002_03377	0.79	-0.2
3,779,827	-		MIT1002_03377	0.81	+2.1
3,779,873	+		MIT1002_03377	0.86	-3.0
3,779,914	-				-0.6
3,779,916	+				-1.1
3,779,924	-				-1.0
3,779,924	-				-1.8
3,779,950	+				+0.9
3,779,960	+				+1.5
3,780,002	-				-0.7
3,780,768	-				+0.8