Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03325

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,712,767	-		MIT1002_03324	0.47	+1.3
3,712,767	-		MIT1002_03324	0.47	+0.4
3,712,790	+		MIT1002_03324	0.49	-0.8
3,712,837	+		MIT1002_03324	0.52	-0.9
3,712,845	-		MIT1002_03324	0.53	-0.4
3,712,845	-		MIT1002_03324	0.53	+0.6
3,712,893	-		MIT1002_03324	0.57	-0.1
3,712,914	+		MIT1002_03324	0.58	+0.2
3,712,922	-		MIT1002_03324	0.59	+1.2
3,712,922	-		MIT1002_03324	0.59	+0.1
3,712,952	-		MIT1002_03324	0.61	+0.5
3,713,015	+		MIT1002_03324	0.66	-0.3
3,713,023	-		MIT1002_03324	0.66	-1.3
3,713,146	-		MIT1002_03324	0.76	-0.1
3,713,184	+		MIT1002_03324	0.79	-1.9
3,713,189	+		MIT1002_03324	0.79	-0.4
3,713,189	+		MIT1002_03324	0.79	+0.1
3,713,311	-		MIT1002_03324	0.88	-0.6
3,713,353	+				+0.1
3,713,475	-				-0.3
3,713,475	-				-2.0
3,713,520	-				+0.2
3,713,620	+				-0.1
3,713,620	+				+0.0
3,713,627	-				+0.7
3,713,628	-				-1.3
3,713,628	-				+0.6
3,713,643	+				-0.8
3,713,699	-				-1.8
3,713,709	-				+1.1
3,713,797	-				+0.6
3,713,875	+		MIT1002_03325	0.16	+1.2
3,713,875	+		MIT1002_03325	0.16	-0.2
3,713,883	-		MIT1002_03325	0.17	+0.8
3,713,925	-		MIT1002_03325	0.22	-1.0
3,713,971	+		MIT1002_03325	0.27	+2.5
3,714,075	+		MIT1002_03325	0.39	+1.2
3,714,075	+		MIT1002_03325	0.39	+1.0
3,714,117	-		MIT1002_03325	0.44	+2.0
3,714,209	+		MIT1002_03325	0.54	-0.3
3,714,246	+		MIT1002_03325	0.58	+1.8
3,714,246	+		MIT1002_03325	0.58	+0.9
3,714,254	-		MIT1002_03325	0.59	+1.7
3,714,254	-		MIT1002_03325	0.59	+1.8
3,714,310	+		MIT1002_03325	0.65	+2.7
3,714,335	-		MIT1002_03325	0.68	-1.5
3,714,421	+		MIT1002_03325	0.78	-2.1
3,714,441	-		MIT1002_03325	0.80	+1.8
3,714,447	+		MIT1002_03325	0.81	+0.1
3,714,456	-		MIT1002_03325	0.82	+1.4
3,714,493	+		MIT1002_03325	0.86	+0.0
3,714,524	+		MIT1002_03325	0.90	-0.3
3,714,821	-				-0.6
3,714,822	-				+3.3
3,714,838	-				+0.3
3,714,869	-		MIT1002_03326	0.10	-0.9
3,714,925	+		MIT1002_03326	0.14	+0.1
3,714,977	-		MIT1002_03326	0.18	+1.4
3,715,027	+		MIT1002_03326	0.21	-0.9
3,715,027	+		MIT1002_03326	0.21	+1.3
3,715,027	+		MIT1002_03326	0.21	-0.9
3,715,027	+		MIT1002_03326	0.21	+0.8
3,715,027	+		MIT1002_03326	0.21	+1.4
3,715,027	+		MIT1002_03326	0.21	-1.9
3,715,035	-		MIT1002_03326	0.21	+1.0
3,715,035	-		MIT1002_03326	0.21	+3.1
3,715,035	-		MIT1002_03326	0.21	+1.4
3,715,051	+		MIT1002_03326	0.22	+0.3
3,715,075	-		MIT1002_03326	0.24	+1.7
3,715,090	+		MIT1002_03326	0.25	+0.5
3,715,107	+		MIT1002_03326	0.26	-0.2
3,715,258	+		MIT1002_03326	0.36	+1.0
3,715,274	+		MIT1002_03326	0.37	+0.1
3,715,275	-		MIT1002_03326	0.37	+1.7
3,715,276	-		MIT1002_03326	0.37	-0.3
3,715,288	-		MIT1002_03326	0.38	+1.3
3,715,303	-		MIT1002_03326	0.39	-1.0
3,715,307	+		MIT1002_03326	0.40	-0.1
3,715,320	-		MIT1002_03326	0.40	+0.7
3,715,363	+		MIT1002_03326	0.43	-1.8
3,715,434	+		MIT1002_03326	0.48	+0.9
3,715,457	-		MIT1002_03326	0.50	+1.4
3,715,525	+		MIT1002_03326	0.54	+1.9
3,715,530	+		MIT1002_03326	0.54	-1.0
3,715,530	+		MIT1002_03326	0.54	+1.3
3,715,530	+		MIT1002_03326	0.54	+1.0
3,715,530	+		MIT1002_03326	0.54	+1.6
3,715,530	+		MIT1002_03326	0.54	-0.3
3,715,533	-		MIT1002_03326	0.55	+0.6
3,715,538	-		MIT1002_03326	0.55	+0.4
3,715,538	-		MIT1002_03326	0.55	+1.3
3,715,538	-		MIT1002_03326	0.55	-0.6
3,715,538	-		MIT1002_03326	0.55	+1.0