Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03319

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,704,150	+		MIT1002_03318	0.63	-0.7
3,704,177	+		MIT1002_03318	0.64	-1.3
3,704,179	-		MIT1002_03318	0.64	+0.3
3,704,203	+		MIT1002_03318	0.65	-2.1
3,704,203	+		MIT1002_03318	0.65	+0.9
3,704,211	-		MIT1002_03318	0.65	+0.5
3,704,211	-		MIT1002_03318	0.65	-0.0
3,704,211	-		MIT1002_03318	0.65	-0.3
3,704,211	-		MIT1002_03318	0.65	+0.6
3,704,213	-		MIT1002_03318	0.65	-2.9
3,704,322	+		MIT1002_03318	0.69	-3.3
3,704,347	+		MIT1002_03318	0.70	-0.7
3,704,497	+		MIT1002_03318	0.76	-1.3
3,704,522	-		MIT1002_03318	0.77	-3.6
3,704,563	+		MIT1002_03318	0.79	+0.6
3,704,563	+		MIT1002_03318	0.79	-2.8
3,704,563	+		MIT1002_03318	0.79	+0.3
3,704,718	+		MIT1002_03318	0.85	-3.1
3,704,819	-		MIT1002_03318	0.89	-2.8
3,704,861	-				-1.4
3,704,886	-				-1.4
3,704,886	-				+0.8
3,704,886	-				-1.6
3,704,943	-				-2.3
3,704,959	-				-4.7
3,704,967	-				-2.9
3,704,967	-				-2.1
3,705,053	-				+0.1
3,705,091	+				-2.9
3,705,163	+				-1.4
3,705,164	+				-2.1
3,705,171	-				-6.1
3,705,433	+		MIT1002_03319	0.30	-0.9
3,705,469	+		MIT1002_03319	0.33	+0.1
3,705,469	+		MIT1002_03319	0.33	-1.0
3,705,503	-		MIT1002_03319	0.36	-3.5
3,705,513	-		MIT1002_03319	0.37	-0.7
3,705,595	+		MIT1002_03319	0.43	-2.7
3,705,618	-		MIT1002_03319	0.45	-5.2
3,705,627	+		MIT1002_03319	0.46	-2.0
3,705,653	+		MIT1002_03319	0.48	-1.5
3,705,661	-		MIT1002_03319	0.49	-1.0
3,705,680	-		MIT1002_03319	0.51	-1.8
3,705,738	+		MIT1002_03319	0.55	-1.5
3,705,833	-		MIT1002_03319	0.63	-2.4
3,705,833	-		MIT1002_03319	0.63	-1.4
3,705,833	-		MIT1002_03319	0.63	+0.1
3,705,836	-		MIT1002_03319	0.64	-1.1
3,705,838	-		MIT1002_03319	0.64	-2.2
3,705,856	-		MIT1002_03319	0.65	-0.4
3,705,858	+		MIT1002_03319	0.65	+0.1
3,705,858	+		MIT1002_03319	0.65	-2.6
3,705,878	-		MIT1002_03319	0.67	-0.8
3,705,878	-		MIT1002_03319	0.67	-3.6
3,705,991	-		MIT1002_03319	0.77	-1.2
3,706,031	-		MIT1002_03319	0.80	-3.0
3,706,031	-		MIT1002_03319	0.80	-0.6
3,706,088	-		MIT1002_03319	0.85	-0.4
3,706,088	-		MIT1002_03319	0.85	-1.5
3,706,094	-		MIT1002_03319	0.85	-0.8
3,706,102	-		MIT1002_03319	0.86	-2.9
3,706,143	+		MIT1002_03319	0.89	-0.3
3,706,158	+				-2.5
3,706,163	+				-2.4
3,706,171	-				-3.3
3,706,178	+				-1.9
3,706,178	+				-2.2
3,706,186	-				+0.6
3,706,186	-				-1.8
3,706,186	-				-3.2
3,706,188	+				-0.7
3,706,188	+				+0.9
3,706,196	-				-2.4
3,706,198	+				-2.8
3,706,218	-				-0.7
3,706,239	-				-3.3
3,706,250	+				-0.0
3,706,250	+				-1.2
3,706,311	+				-3.8
3,706,316	+				-0.5
3,706,316	+				-1.6
3,706,324	-				+2.9
3,706,339	-				+0.6
3,706,391	-				-3.1
3,706,391	-				-0.1
3,706,446	+				-0.0
3,706,502	-		MIT1002_03320	0.13	+0.3
3,706,509	+		MIT1002_03320	0.13	+0.3
3,706,573	-		MIT1002_03320	0.16	+0.3
3,706,583	-		MIT1002_03320	0.16	-1.1
3,706,608	-		MIT1002_03320	0.18	-0.1
3,706,608	-		MIT1002_03320	0.18	-0.3
3,706,608	-		MIT1002_03320	0.18	+1.3
3,706,655	-		MIT1002_03320	0.20	+0.2
3,706,655	-		MIT1002_03320	0.20	+0.4
3,706,684	+		MIT1002_03320	0.21	-0.3
3,706,786	+		MIT1002_03320	0.26	+0.7
3,706,796	+		MIT1002_03320	0.27	+1.3
3,706,804	-		MIT1002_03320	0.27	-0.8
3,706,804	-		MIT1002_03320	0.27	+0.6
3,706,825	-		MIT1002_03320	0.28	+1.8
3,706,903	-		MIT1002_03320	0.32	-0.0
3,706,905	-		MIT1002_03320	0.32	-1.7
3,707,033	+		MIT1002_03320	0.38	+0.8
3,707,046	+		MIT1002_03320	0.39	-0.6
3,707,054	-		MIT1002_03320	0.39	+0.3
3,707,108	-		MIT1002_03320	0.42	+0.3
3,707,119	+		MIT1002_03320	0.42	+0.3
3,707,127	-		MIT1002_03320	0.42	+0.6
3,707,154	-		MIT1002_03320	0.44	-0.1
3,707,203	-		MIT1002_03320	0.46	-1.1
3,707,221	+		MIT1002_03320	0.47	+0.5