Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03288

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,662,642	+		MIT1002_03286	0.78	-0.1
3,662,689	-		MIT1002_03286	0.83	-1.2
3,662,728	-		MIT1002_03286	0.87	-1.5
3,662,771	+				-0.3
3,662,771	+				-1.8
3,662,771	+				+0.8
3,662,779	-				-2.2
3,662,779	-				-0.2
3,662,786	-				-0.3
3,662,838	+				+1.6
3,663,016	+		MIT1002_03287	0.22	-1.5
3,663,024	-		MIT1002_03287	0.24	-0.8
3,663,169	-		MIT1002_03287	0.43	-0.7
3,663,176	+		MIT1002_03287	0.44	-1.2
3,663,204	-		MIT1002_03287	0.47	+0.5
3,663,340	+		MIT1002_03287	0.65	+0.3
3,663,371	-		MIT1002_03287	0.69	-1.6
3,663,402	+		MIT1002_03287	0.74	-0.4
3,663,404	+		MIT1002_03287	0.74	-2.5
3,663,419	-		MIT1002_03287	0.76	-1.3
3,663,455	-		MIT1002_03287	0.81	+0.4
3,663,472	+		MIT1002_03287	0.83	+1.9
3,663,472	+		MIT1002_03287	0.83	+0.3
3,663,474	+		MIT1002_03287	0.83	-0.8
3,663,633	+				+1.4
3,663,723	+		MIT1002_03288	0.31	-1.3
3,663,772	+		MIT1002_03288	0.44	-1.2
3,663,772	+		MIT1002_03288	0.44	-2.7
3,663,772	+		MIT1002_03288	0.44	-2.1
3,663,780	-		MIT1002_03288	0.46	+0.1
3,663,787	+		MIT1002_03288	0.48	-3.0
3,663,823	-		MIT1002_03288	0.57	-2.6
3,663,881	+		MIT1002_03288	0.72	+1.3
3,663,891	+		MIT1002_03288	0.74	+0.9
3,663,956	-				-2.4
3,664,078	+				-1.8
3,664,078	+				-1.3
3,664,086	-				-2.9
3,664,129	+		MIT1002_03289	0.13	-1.9
3,664,129	+		MIT1002_03289	0.13	-1.8
3,664,137	-		MIT1002_03289	0.14	-0.1
3,664,137	-		MIT1002_03289	0.14	-0.4
3,664,142	-		MIT1002_03289	0.14	-1.1
3,664,142	-		MIT1002_03289	0.14	-0.6
3,664,276	+		MIT1002_03289	0.25	-2.0
3,664,284	+		MIT1002_03289	0.26	-1.1
3,664,292	-		MIT1002_03289	0.27	-1.6
3,664,292	-		MIT1002_03289	0.27	+0.3
3,664,292	-		MIT1002_03289	0.27	-2.7
3,664,373	+		MIT1002_03289	0.34	+0.6
3,664,453	-		MIT1002_03289	0.41	+0.7
3,664,458	+		MIT1002_03289	0.41	-0.1
3,664,458	+		MIT1002_03289	0.41	-0.9
3,664,466	-		MIT1002_03289	0.42	-0.1
3,664,485	-		MIT1002_03289	0.43	+0.6
3,664,579	-		MIT1002_03289	0.52	-1.4
3,664,614	+		MIT1002_03289	0.55	-0.6
3,664,644	+		MIT1002_03289	0.57	-2.7
3,664,679	+		MIT1002_03289	0.60	-0.1
3,664,762	-		MIT1002_03289	0.67	-0.1
3,664,787	-		MIT1002_03289	0.70	-2.3
3,664,800	-		MIT1002_03289	0.71	-2.0
3,664,868	+		MIT1002_03289	0.76	-1.3
3,664,974	-		MIT1002_03289	0.86	-1.4