Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03221

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,591,056	+		MIT1002_03220	0.54	+0.1
3,591,088	+		MIT1002_03220	0.56	+0.1
3,591,102	+		MIT1002_03220	0.57	-0.8
3,591,131	+		MIT1002_03220	0.58	-0.1
3,591,184	+		MIT1002_03220	0.61	+0.4
3,591,192	-		MIT1002_03220	0.61	+0.2
3,591,253	+		MIT1002_03220	0.64	-0.9
3,591,263	+		MIT1002_03220	0.65	-0.7
3,591,283	-		MIT1002_03220	0.66	-0.4
3,591,283	-		MIT1002_03220	0.66	+1.4
3,591,290	-		MIT1002_03220	0.66	-1.1
3,591,350	-		MIT1002_03220	0.69	-1.6
3,591,355	-		MIT1002_03220	0.69	-0.8
3,591,383	+		MIT1002_03220	0.71	-0.4
3,591,423	+		MIT1002_03220	0.73	-0.9
3,591,423	+		MIT1002_03220	0.73	-1.5
3,591,425	-		MIT1002_03220	0.73	+1.8
3,591,457	+		MIT1002_03220	0.74	-1.0
3,591,634	-		MIT1002_03220	0.83	-1.0
3,591,755	+		MIT1002_03220	0.89	-0.5
3,591,763	-		MIT1002_03220	0.89	+0.7
3,591,763	-		MIT1002_03220	0.89	+0.2
3,591,773	-		MIT1002_03220	0.90	-1.3
3,591,788	+				-2.2
3,591,840	-				+0.1
3,591,855	+				-1.6
3,591,938	+				-2.4
3,591,938	+				+1.2
3,591,977	+				+0.1
3,591,979	+				+2.3
3,591,979	+				+0.1
3,591,987	-				+0.4
3,591,987	-				-0.1
3,592,003	+				-0.1
3,592,159	-		MIT1002_03221	0.19	-0.8
3,592,218	+		MIT1002_03221	0.26	+0.7
3,592,248	-		MIT1002_03221	0.29	+0.6
3,592,262	-		MIT1002_03221	0.30	-0.0
3,592,274	+		MIT1002_03221	0.32	+1.4
3,592,295	+		MIT1002_03221	0.34	-0.4
3,592,295	+		MIT1002_03221	0.34	+0.7
3,592,308	-		MIT1002_03221	0.36	+1.7
3,592,313	+		MIT1002_03221	0.36	-0.9
3,592,330	-		MIT1002_03221	0.38	-1.3
3,592,364	+		MIT1002_03221	0.42	-1.4
3,592,387	-		MIT1002_03221	0.44	-0.7
3,592,396	+		MIT1002_03221	0.45	-0.1
3,592,404	-		MIT1002_03221	0.46	-1.3
3,592,406	+		MIT1002_03221	0.46	+1.7
3,592,414	-		MIT1002_03221	0.47	-0.4
3,592,457	-		MIT1002_03221	0.52	+0.4
3,592,457	-		MIT1002_03221	0.52	-1.3
3,592,459	+		MIT1002_03221	0.52	-3.1
3,592,564	-		MIT1002_03221	0.64	+1.4
3,592,603	-		MIT1002_03221	0.68	+0.2
3,592,685	-		MIT1002_03221	0.78	+1.6
3,592,803	+				+1.1
3,592,803	+				-1.9
3,592,803	+				+0.8
3,592,811	-				-0.5
3,592,811	-				-2.2
3,592,811	-				-0.8
3,592,811	-				-0.1
3,592,811	-				+0.3
3,592,857	-				-2.1
3,592,861	+				-0.9
3,592,863	+				-0.4
3,592,863	+				+1.4
3,592,863	+				+0.6
3,592,869	-				-0.1
3,592,869	-				-2.1
3,592,871	-				+4.4
3,592,871	-				+0.1
3,593,024	+				+0.2
3,593,037	+				+0.1
3,593,061	+				-0.1
3,593,075	+				+0.0
3,593,083	-				+0.2
3,593,083	-				+4.5
3,593,204	+		MIT1002_03222	0.16	+2.0
3,593,212	+		MIT1002_03222	0.16	-0.4
3,593,239	-		MIT1002_03222	0.19	-0.4
3,593,301	+		MIT1002_03222	0.25	+1.5
3,593,309	-		MIT1002_03222	0.26	+0.1
3,593,317	+		MIT1002_03222	0.27	-0.1
3,593,325	-		MIT1002_03222	0.27	-0.1
3,593,359	+		MIT1002_03222	0.31	+0.7
3,593,385	-		MIT1002_03222	0.33	-0.6
3,593,398	-		MIT1002_03222	0.35	+1.1
3,593,398	-		MIT1002_03222	0.35	-1.8
3,593,476	-		MIT1002_03222	0.42	-0.1
3,593,511	+		MIT1002_03222	0.46	-0.9
3,593,521	-		MIT1002_03222	0.47	-1.1
3,593,617	-		MIT1002_03222	0.56	-2.1
3,593,623	-		MIT1002_03222	0.57	+1.6
3,593,664	+		MIT1002_03222	0.61	-2.3
3,593,672	-		MIT1002_03222	0.62	+0.1
3,593,680	-		MIT1002_03222	0.62	+0.3
3,593,680	-		MIT1002_03222	0.62	-0.9
3,593,794	+		MIT1002_03222	0.74	-1.3
3,593,860	+		MIT1002_03222	0.80	+0.5
3,593,876	+		MIT1002_03222	0.82	+0.4
3,593,876	+		MIT1002_03222	0.82	+0.9
3,593,876	+		MIT1002_03222	0.82	-1.5
3,593,884	-		MIT1002_03222	0.82	-0.2