Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03052

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,405,685	-		MIT1002_03051	0.74	-0.4
3,405,704	+		MIT1002_03051	0.75	-1.1
3,405,712	-		MIT1002_03051	0.75	-0.5
3,405,716	+		MIT1002_03051	0.76	-0.1
3,405,742	+		MIT1002_03051	0.77	-0.1
3,405,750	-		MIT1002_03051	0.77	+0.7
3,405,844	+		MIT1002_03051	0.83	+0.3
3,405,855	+		MIT1002_03051	0.83	+0.7
3,405,898	+		MIT1002_03051	0.86	-0.9
3,405,905	+		MIT1002_03051	0.86	-1.5
3,405,906	-		MIT1002_03051	0.86	-1.5
3,405,913	-		MIT1002_03051	0.87	-0.6
3,405,940	+		MIT1002_03051	0.88	-0.2
3,405,959	+		MIT1002_03051	0.89	-2.1
3,405,959	+		MIT1002_03051	0.89	-0.6
3,405,966	+		MIT1002_03051	0.89	-1.1
3,405,972	-		MIT1002_03051	0.90	-1.6
3,405,977	-				-0.4
3,406,000	+				+0.0
3,406,010	+				-0.5
3,406,010	+				+1.0
3,406,021	+				+0.7
3,406,038	-				-1.0
3,406,038	-				-0.2
3,406,046	+				-0.0
3,406,060	-				+0.9
3,406,065	-				+2.3
3,406,069	+				-1.8
3,406,070	-				+0.6
3,406,198	-				-1.8
3,406,214	-				-1.1
3,406,258	+				+1.7
3,406,258	+				+0.2
3,406,258	+				+2.2
3,406,258	+				-0.8
3,406,265	+				-0.6
3,406,266	-				+0.3
3,406,266	-				+0.8
3,406,266	-				+1.5
3,406,266	-				+0.5
3,406,266	-				-1.5
3,406,266	-				+0.4
3,406,273	-				-0.3
3,406,273	-				-0.4
3,406,273	-				+0.4
3,406,338	+				-0.2
3,406,394	+				-0.3
3,406,406	+				-0.7
3,406,413	+				-1.0
3,406,527	+				+2.2
3,406,721	-				+0.9
3,406,731	-				+0.2
3,406,752	-		MIT1002_03052	0.12	-1.3
3,406,896	+		MIT1002_03052	0.30	-1.7
3,406,896	+		MIT1002_03052	0.30	-0.6
3,406,896	+		MIT1002_03052	0.30	-0.4
3,406,896	+		MIT1002_03052	0.30	+0.2
3,406,904	+		MIT1002_03052	0.31	-0.7
3,406,904	-		MIT1002_03052	0.31	+0.1
3,406,911	-		MIT1002_03052	0.32	-1.0
3,406,977	+		MIT1002_03052	0.40	-0.2
3,406,979	+		MIT1002_03052	0.40	+0.1
3,406,985	-		MIT1002_03052	0.41	+1.7
3,406,987	-		MIT1002_03052	0.41	+0.0
3,406,989	+		MIT1002_03052	0.42	-1.4
3,407,031	-		MIT1002_03052	0.47	+1.0
3,407,044	+		MIT1002_03052	0.48	+1.2
3,407,057	-		MIT1002_03052	0.50	+0.5
3,407,163	-		MIT1002_03052	0.63	+2.4
3,407,183	+		MIT1002_03052	0.66	-1.2
3,407,185	+		MIT1002_03052	0.66	-1.3
3,407,185	+		MIT1002_03052	0.66	-0.0
3,407,185	-		MIT1002_03052	0.66	-1.1
3,407,273	-		MIT1002_03052	0.77	-1.2
3,407,273	-		MIT1002_03052	0.77	+1.2
3,407,276	+		MIT1002_03052	0.78	-1.9
3,407,288	+		MIT1002_03052	0.79	-1.8
3,407,307	+		MIT1002_03052	0.81	-0.9
3,407,365	+		MIT1002_03052	0.89	-1.8
3,407,365	+		MIT1002_03052	0.89	-0.7
3,407,418	+				+2.4
3,407,424	+				-0.8
3,407,426	-				-0.6
3,407,543	-				-0.9
3,407,620	-				-2.8
3,407,659	-				-0.6