Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02912

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,236,039	+				-1.2
3,236,047	-				+0.5
3,236,154	+				-1.1
3,236,156	+				+0.9
3,236,281	+		MIT1002_02911	0.22	+0.5
3,236,281	+		MIT1002_02911	0.22	-0.4
3,236,286	-		MIT1002_02911	0.23	-2.3
3,236,289	-		MIT1002_02911	0.24	+0.3
3,236,389	+		MIT1002_02911	0.37	-1.0
3,236,420	+		MIT1002_02911	0.42	+0.5
3,236,420	+		MIT1002_02911	0.42	-0.1
3,236,435	-		MIT1002_02911	0.44	-1.3
3,236,483	+		MIT1002_02911	0.50	+1.3
3,236,491	-		MIT1002_02911	0.51	+0.9
3,236,541	+		MIT1002_02911	0.58	-0.3
3,236,562	+		MIT1002_02911	0.61	-0.6
3,236,570	-		MIT1002_02911	0.62	+2.1
3,236,614	-		MIT1002_02911	0.68	-1.1
3,236,652	+		MIT1002_02911	0.74	+0.0
3,236,697	+		MIT1002_02911	0.80	+0.1
3,236,702	+		MIT1002_02911	0.81	+0.7
3,236,743	-		MIT1002_02911	0.86	+0.5
3,236,813	-				-0.7
3,236,855	+				+0.0
3,236,918	+				-0.1
3,236,967	-				-0.7
3,236,996	+				-0.2
3,237,015	+				-1.4
3,237,023	-				+0.5
3,237,023	-				-1.2
3,237,023	-				+0.8
3,237,023	-				+0.6
3,237,023	-				+0.9
3,237,025	+				+0.4
3,237,030	+				-0.9
3,237,033	-				+1.6
3,237,033	-				-1.0
3,237,038	-				-0.8
3,237,075	+		MIT1002_02912	0.12	-0.2
3,237,077	+		MIT1002_02912	0.12	-0.3
3,237,085	-		MIT1002_02912	0.13	-1.3
3,237,085	-		MIT1002_02912	0.13	-2.3
3,237,085	-		MIT1002_02912	0.13	+1.2
3,237,120	+		MIT1002_02912	0.16	-1.7
3,237,120	+		MIT1002_02912	0.16	-0.3
3,237,128	+		MIT1002_02912	0.17	+1.2
3,237,128	+		MIT1002_02912	0.17	-0.5
3,237,130	+		MIT1002_02912	0.17	+0.3
3,237,157	+		MIT1002_02912	0.20	-0.0
3,237,173	-		MIT1002_02912	0.22	+0.7
3,237,184	-		MIT1002_02912	0.23	+0.3
3,237,212	+		MIT1002_02912	0.25	-0.0
3,237,293	+		MIT1002_02912	0.34	+0.6
3,237,433	-		MIT1002_02912	0.48	+0.4
3,237,482	+		MIT1002_02912	0.53	+0.6
3,237,544	-		MIT1002_02912	0.59	+0.0
3,237,563	+		MIT1002_02912	0.61	+1.9
3,237,563	+		MIT1002_02912	0.61	+1.7
3,237,571	-		MIT1002_02912	0.62	+0.0
3,237,610	+		MIT1002_02912	0.66	+1.0
3,237,610	+		MIT1002_02912	0.66	+0.3
3,237,618	-		MIT1002_02912	0.66	+0.5
3,237,656	-		MIT1002_02912	0.70	+0.8
3,237,664	+		MIT1002_02912	0.71	+1.8
3,237,665	-		MIT1002_02912	0.71	+0.2
3,237,665	-		MIT1002_02912	0.71	-2.1
3,237,667	+		MIT1002_02912	0.71	-1.2
3,237,667	+		MIT1002_02912	0.71	+0.8
3,237,667	+		MIT1002_02912	0.71	+0.5
3,237,667	+		MIT1002_02912	0.71	+1.4
3,237,672	-		MIT1002_02912	0.72	+0.8
3,237,672	-		MIT1002_02912	0.72	-0.4
3,237,675	-		MIT1002_02912	0.72	+0.3
3,237,710	+		MIT1002_02912	0.76	+0.0
3,237,777	+		MIT1002_02912	0.83	+1.7
3,237,793	-		MIT1002_02912	0.84	+0.5
3,237,801	+		MIT1002_02912	0.85	+1.2
3,237,817	-		MIT1002_02912	0.87	-0.2
3,237,819	-		MIT1002_02912	0.87	-0.9
3,237,820	+		MIT1002_02912	0.87	-0.2
3,237,828	-		MIT1002_02912	0.88	+0.8
3,237,828	-		MIT1002_02912	0.88	-2.1
3,237,835	+		MIT1002_02912	0.88	-0.8
3,237,835	+		MIT1002_02912	0.88	+0.5
3,237,843	-		MIT1002_02912	0.89	-0.5
3,237,876	+				+0.1
3,237,888	+				-0.3
3,237,888	+				-2.4
3,237,888	+				-0.5
3,237,896	-				-1.1
3,237,896	-				-0.9
3,237,902	-				+1.5
3,237,988	-				+0.2
3,238,014	+		MIT1002_02913	0.12	+0.2
3,238,014	+		MIT1002_02913	0.12	-2.1
3,238,022	-		MIT1002_02913	0.14	-0.3
3,238,045	-		MIT1002_02913	0.19	-1.1
3,238,054	+		MIT1002_02913	0.21	+0.3
3,238,054	+		MIT1002_02913	0.21	+0.4
3,238,102	-		MIT1002_02913	0.31	+0.7
3,238,108	+		MIT1002_02913	0.32	-1.7
3,238,118	+		MIT1002_02913	0.34	-0.7
3,238,126	-		MIT1002_02913	0.36	-1.4
3,238,212	+		MIT1002_02913	0.54	+0.8
3,238,217	-		MIT1002_02913	0.55	+2.4
3,238,431	+				-1.8
3,238,603	+		MIT1002_02914	0.17	-1.1
3,238,636	-		MIT1002_02914	0.26	+0.7
3,238,665	-		MIT1002_02914	0.33	-0.5
3,238,698	-		MIT1002_02914	0.42	-0.5
3,238,715	-		MIT1002_02914	0.46	-1.0
3,238,757	+		MIT1002_02914	0.57	+2.5
3,238,778	-		MIT1002_02914	0.63	-0.5
3,238,794	+		MIT1002_02914	0.67	-1.2
3,238,802	-		MIT1002_02914	0.69	-2.3
3,238,829	+		MIT1002_02914	0.76	+0.7
3,238,838	-		MIT1002_02914	0.79	+0.2
3,238,838	-		MIT1002_02914	0.79	+0.4
3,238,856	+		MIT1002_02914	0.83	+1.3
3,238,921	-				-0.2