Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02824

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,126,464	+		MIT1002_02822	0.72	+0.3
3,126,520	+		MIT1002_02822	0.77	-1.7
3,126,607	+		MIT1002_02822	0.84	-1.7
3,126,671	+		MIT1002_02822	0.90	-0.9
3,126,671	+		MIT1002_02822	0.90	+1.8
3,126,679	+				-0.7
3,126,685	-				-0.7
3,126,687	-				+0.2
3,126,748	-				+1.3
3,126,803	+				+0.5
3,126,918	-		MIT1002_02823	0.20	-0.1
3,126,918	-		MIT1002_02823	0.20	-1.2
3,126,918	-		MIT1002_02823	0.20	-0.7
3,126,922	+		MIT1002_02823	0.21	-0.8
3,126,923	-		MIT1002_02823	0.21	+2.6
3,126,932	-		MIT1002_02823	0.23	-1.0
3,126,940	-		MIT1002_02823	0.24	+0.0
3,126,940	-		MIT1002_02823	0.24	-0.9
3,126,973	+		MIT1002_02823	0.30	-2.3
3,126,981	-		MIT1002_02823	0.32	+1.4
3,127,027	+		MIT1002_02823	0.40	+0.6
3,127,075	-		MIT1002_02823	0.49	+1.4
3,127,081	+		MIT1002_02823	0.50	-1.5
3,127,081	+		MIT1002_02823	0.50	-0.2
3,127,089	-		MIT1002_02823	0.52	-2.3
3,127,333	+				-0.5
3,127,341	-				-0.6
3,127,341	-				-1.3
3,127,373	+				+0.8
3,127,381	-				-1.5
3,127,618	+		MIT1002_02824	0.32	+0.8
3,127,626	-		MIT1002_02824	0.33	-1.3
3,127,643	-		MIT1002_02824	0.35	-1.6
3,127,653	-		MIT1002_02824	0.37	-1.3
3,127,659	+		MIT1002_02824	0.38	-0.3
3,127,689	+		MIT1002_02824	0.42	-0.2
3,127,783	+		MIT1002_02824	0.55	-1.1
3,127,859	-		MIT1002_02824	0.66	-1.7
3,127,893	-		MIT1002_02824	0.71	-1.9
3,127,903	-		MIT1002_02824	0.72	+0.0
3,127,939	-		MIT1002_02824	0.77	-0.3
3,127,939	-		MIT1002_02824	0.77	-0.6
3,127,956	-		MIT1002_02824	0.80	+2.4
3,127,974	+		MIT1002_02824	0.82	-1.5
3,128,028	+				+2.5
3,128,043	+				-1.6
3,128,226	-				-1.2
3,128,273	-				+0.5
3,128,331	-				+1.0
3,128,371	-				+0.8
3,128,390	+				-1.2
3,128,402	+				+0.7
3,128,402	+				-0.2
3,128,429	+				-1.6
3,128,480	-				-1.2
3,128,482	-				-0.4
3,128,495	+				+0.3
3,128,495	+				+1.3
3,128,495	+				-0.4
3,128,495	+				+1.1
3,128,495	+				-0.3
3,128,495	+				+1.2
3,128,495	+				-0.1
3,128,495	+				+0.3
3,128,495	+				+0.3
3,128,497	-				-1.7
3,128,503	-				-1.5
3,128,503	-				-0.7
3,128,503	-				-0.2
3,128,503	-				-1.0
3,128,503	-				-0.5
3,128,503	-				-1.4
3,128,534	-		MIT1002_02825	0.14	-0.9
3,128,539	-		MIT1002_02825	0.15	+0.4
3,128,541	-		MIT1002_02825	0.15	-0.5
3,128,713	-		MIT1002_02825	0.39	-0.4
3,128,738	+		MIT1002_02825	0.42	-0.1
3,128,738	+		MIT1002_02825	0.42	-0.6
3,128,746	-		MIT1002_02825	0.43	+0.6
3,128,759	-		MIT1002_02825	0.45	-1.7
3,128,784	-		MIT1002_02825	0.48	+0.7
3,128,799	-		MIT1002_02825	0.50	+1.5
3,128,830	+		MIT1002_02825	0.55	-1.3
3,128,881	-		MIT1002_02825	0.62	-0.4
3,128,886	-		MIT1002_02825	0.63	+1.3
3,128,928	-		MIT1002_02825	0.68	+0.2
3,128,929	-		MIT1002_02825	0.68	-0.2
3,128,951	+		MIT1002_02825	0.72	+0.0
3,128,959	-		MIT1002_02825	0.73	+0.1