Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02754

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
3,057,406	+		MIT1002_02753	0.48	+1.4
3,057,444	-		MIT1002_02753	0.51	-0.5
3,057,471	-		MIT1002_02753	0.54	+0.9
3,057,546	+		MIT1002_02753	0.60	-2.0
3,057,546	+		MIT1002_02753	0.60	+0.9
3,057,567	+		MIT1002_02753	0.62	+0.7
3,057,653	-		MIT1002_02753	0.69	-0.7
3,057,698	+		MIT1002_02753	0.73	-1.1
3,057,828	-		MIT1002_02753	0.84	-0.4
3,057,986	+				-1.4
3,058,005	-				-0.3
3,058,028	-				-0.6
3,058,065	+				-0.2
3,058,092	+				+0.2
3,058,344	+		MIT1002_02754	0.53	-1.2
3,058,409	+				+1.2
3,058,541	-				-1.2
3,058,623	+				-0.1
3,058,627	+				-0.3
3,058,631	-				-0.2
3,058,631	-				-0.1
3,058,684	-				+0.3
3,058,686	+				-0.9
3,058,694	-				+0.3
3,058,739	+				-2.3
3,058,773	-		MIT1002_02755	0.12	-0.2
3,059,022	-		MIT1002_02755	0.25	-1.2
3,059,094	-		MIT1002_02755	0.29	-1.2
3,059,113	+		MIT1002_02755	0.30	-1.9
3,059,173	-		MIT1002_02755	0.33	-2.7
3,059,251	+		MIT1002_02755	0.37	-1.2
3,059,277	+		MIT1002_02755	0.38	-3.3
3,059,322	+		MIT1002_02755	0.41	-3.1