Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02565

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
2,861,929	+		MIT1002_02564	0.27	-1.1
2,862,023	+		MIT1002_02564	0.35	-0.1
2,862,026	-		MIT1002_02564	0.35	-1.9
2,862,031	-		MIT1002_02564	0.35	+0.8
2,862,032	-		MIT1002_02564	0.35	+0.3
2,862,152	-		MIT1002_02564	0.45	-0.7
2,862,238	+		MIT1002_02564	0.52	+1.5
2,862,248	-		MIT1002_02564	0.53	+0.7
2,862,264	+		MIT1002_02564	0.54	+1.8
2,862,272	-		MIT1002_02564	0.55	+0.3
2,862,272	-		MIT1002_02564	0.55	+1.1
2,862,384	+		MIT1002_02564	0.64	-0.7
2,862,413	-		MIT1002_02564	0.66	+1.2
2,862,440	-		MIT1002_02564	0.68	+1.0
2,862,457	+		MIT1002_02564	0.70	-0.1
2,862,465	-		MIT1002_02564	0.70	+0.3
2,862,465	-		MIT1002_02564	0.70	+0.3
2,862,493	-		MIT1002_02564	0.73	+1.2
2,862,626	-		MIT1002_02564	0.83	-0.5
2,862,626	-		MIT1002_02564	0.83	-1.4
2,862,698	-		MIT1002_02564	0.89	+1.6
2,862,764	+				-0.2
2,862,797	+				-0.4
2,862,818	-				-0.3
2,862,826	+				+0.6
2,862,826	+				-0.0
2,862,840	+				-2.8
2,862,847	+				-0.0
2,862,848	-				+2.4
2,862,855	-				-0.5
2,862,862	-				-0.7
2,863,064	-		MIT1002_02565	0.47	-1.3
2,863,083	+		MIT1002_02565	0.52	+0.9
2,863,091	-		MIT1002_02565	0.54	-1.6
2,863,094	+		MIT1002_02565	0.55	+0.3
2,863,140	-		MIT1002_02565	0.68	+1.0
2,863,171	-		MIT1002_02565	0.77	+1.4
2,863,239	-				-0.1
2,863,243	+				-0.4
2,863,251	-				-1.8
2,863,287	+				+1.0
2,863,288	+				-0.9
2,863,295	-				-0.8
2,863,295	-				+2.1
2,863,296	-				-2.8
2,863,296	-				-2.9
2,863,314	-				+1.1
2,863,322	+				+1.1
2,863,369	+				+1.8
2,863,500	-				+0.6
2,863,500	-				+0.2
2,863,562	+				-0.9
2,863,588	+				-0.8
2,863,596	-				-0.8
2,863,643	+		MIT1002_02566	0.12	-2.0
2,863,656	+		MIT1002_02566	0.13	-1.4
2,863,665	+		MIT1002_02566	0.13	+1.4
2,863,668	+		MIT1002_02566	0.13	+1.5
2,863,687	+		MIT1002_02566	0.14	-1.8
2,863,687	+		MIT1002_02566	0.14	-1.0
2,863,687	+		MIT1002_02566	0.14	-1.1
2,863,695	-		MIT1002_02566	0.15	-0.3
2,863,695	-		MIT1002_02566	0.15	-2.0
2,863,695	-		MIT1002_02566	0.15	-0.8
2,863,756	-		MIT1002_02566	0.18	+1.0
2,863,756	-		MIT1002_02566	0.18	-2.7
2,863,788	+		MIT1002_02566	0.19	-0.4
2,863,803	-		MIT1002_02566	0.20	+0.9
2,863,888	+		MIT1002_02566	0.24	-0.7
2,864,153	-		MIT1002_02566	0.37	-0.6
2,864,232	+		MIT1002_02566	0.41	+0.9