Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02297

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
2,559,335	-				-0.1
2,559,340	-				+2.1
2,559,413	-		MIT1002_02296	0.14	+1.4
2,559,414	+		MIT1002_02296	0.14	+0.7
2,559,422	-		MIT1002_02296	0.15	+0.3
2,559,422	-		MIT1002_02296	0.15	-0.7
2,559,422	-		MIT1002_02296	0.15	+0.4
2,559,422	-		MIT1002_02296	0.15	+0.1
2,559,422	-		MIT1002_02296	0.15	+1.8
2,559,422	-		MIT1002_02296	0.15	+1.7
2,559,567	+		MIT1002_02296	0.31	+0.3
2,559,567	+		MIT1002_02296	0.31	+0.4
2,559,567	+		MIT1002_02296	0.31	+3.0
2,559,576	-		MIT1002_02296	0.32	+0.1
2,559,638	-		MIT1002_02296	0.38	+1.5
2,559,678	-		MIT1002_02296	0.42	+1.2
2,559,698	-		MIT1002_02296	0.44	+1.3
2,559,830	-		MIT1002_02296	0.58	+2.3
2,559,957	+		MIT1002_02296	0.72	-1.6
2,559,986	-		MIT1002_02296	0.75	+0.5
2,560,059	+		MIT1002_02296	0.82	+0.1
2,560,107	+		MIT1002_02296	0.88	+1.3
2,560,187	+				+1.7
2,560,195	-				+0.4
2,560,219	-				+0.1
2,560,321	-		MIT1002_02297	0.13	+0.1
2,560,404	-		MIT1002_02297	0.25	+2.3
2,560,449	+		MIT1002_02297	0.31	+1.5
2,560,455	-		MIT1002_02297	0.32	+1.2
2,560,470	-		MIT1002_02297	0.34	+1.4
2,560,562	+		MIT1002_02297	0.46	+0.6
2,560,617	-		MIT1002_02297	0.53	+1.8
2,560,690	+		MIT1002_02297	0.63	+1.0
2,560,728	+		MIT1002_02297	0.68	+0.5
2,560,732	+		MIT1002_02297	0.69	-0.6
2,560,736	-		MIT1002_02297	0.70	+1.2
2,560,736	-		MIT1002_02297	0.70	+1.2
2,560,737	-		MIT1002_02297	0.70	+1.7
2,560,797	-		MIT1002_02297	0.78	+2.0
2,560,798	-		MIT1002_02297	0.78	+0.6
2,560,798	-		MIT1002_02297	0.78	+0.9
2,560,878	+		MIT1002_02297	0.89	+1.7
2,561,030	-				+0.5
2,561,032	+				-0.4
2,561,037	+				+0.2
2,561,052	-				+1.5
2,561,053	-				+2.0
2,561,064	-				+0.1
2,561,064	-				-0.2
2,561,264	-		MIT1002_02298	0.23	+1.6
2,561,297	-		MIT1002_02298	0.27	+1.9
2,561,305	+		MIT1002_02298	0.28	+2.3
2,561,313	-		MIT1002_02298	0.29	+2.4
2,561,313	-		MIT1002_02298	0.29	+1.2
2,561,313	-		MIT1002_02298	0.29	-1.9
2,561,352	+		MIT1002_02298	0.35	+0.6
2,561,399	+		MIT1002_02298	0.41	+1.5
2,561,459	-		MIT1002_02298	0.49	-0.1
2,561,463	+		MIT1002_02298	0.50	+2.1
2,561,463	+		MIT1002_02298	0.50	+1.5
2,561,513	+		MIT1002_02298	0.56	+1.6
2,561,536	+		MIT1002_02298	0.59	+1.1
2,561,544	-		MIT1002_02298	0.61	+1.0
2,561,587	+		MIT1002_02298	0.66	+1.9
2,561,592	+		MIT1002_02298	0.67	-0.4
2,561,600	-		MIT1002_02298	0.68	+2.3
2,561,620	-		MIT1002_02298	0.71	-0.8
2,561,624	+		MIT1002_02298	0.71	+1.6
2,561,647	-		MIT1002_02298	0.75	-1.7
2,561,647	-		MIT1002_02298	0.75	+2.2
2,561,652	-		MIT1002_02298	0.75	+1.1
2,561,662	+		MIT1002_02298	0.77	-0.7
2,561,703	+		MIT1002_02298	0.82	-0.0
2,561,743	+		MIT1002_02298	0.88	+0.6
2,561,743	+		MIT1002_02298	0.88	+2.3
2,561,751	-		MIT1002_02298	0.89	+1.9
2,561,751	-		MIT1002_02298	0.89	+0.8
2,561,793	-				+2.3
2,561,793	-				+3.0
2,561,794	-				+2.4