Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02282

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
2,542,122	+				-0.1
2,542,132	+				+0.7
2,542,142	+				-0.3
2,542,193	-				+1.7
2,542,223	+				-1.0
2,542,276	+				+0.6
2,542,323	+				+0.7
2,542,323	+				+1.6
2,542,331	-				-0.3
2,542,352	-				-2.3
2,542,354	+				-1.0
2,542,357	-				+0.0
2,542,381	+		MIT1002_02282	0.11	+0.7
2,542,417	-		MIT1002_02282	0.12	-0.3
2,542,455	-		MIT1002_02282	0.14	-0.6
2,542,493	-		MIT1002_02282	0.16	-1.5
2,542,554	+		MIT1002_02282	0.19	-0.7
2,542,692	-		MIT1002_02282	0.25	-0.7
2,542,711	+		MIT1002_02282	0.26	+0.6
2,542,733	-		MIT1002_02282	0.27	-0.0
2,542,745	+		MIT1002_02282	0.27	+1.1
2,542,757	+		MIT1002_02282	0.28	+0.6
2,542,757	+		MIT1002_02282	0.28	-0.7
2,542,758	-		MIT1002_02282	0.28	-0.4
2,542,758	-		MIT1002_02282	0.28	-2.5
2,542,767	+		MIT1002_02282	0.28	+0.2
2,542,767	+		MIT1002_02282	0.28	-2.3
2,542,767	+		MIT1002_02282	0.28	-0.1
2,542,767	+		MIT1002_02282	0.28	+1.3
2,542,767	+		MIT1002_02282	0.28	-0.6
2,542,767	+		MIT1002_02282	0.28	-0.8
2,542,767	+		MIT1002_02282	0.28	+1.0
2,542,767	+		MIT1002_02282	0.28	-2.3
2,542,767	+		MIT1002_02282	0.28	-0.2
2,542,767	+		MIT1002_02282	0.28	-1.3
2,542,767	+		MIT1002_02282	0.28	-0.4
2,542,772	+		MIT1002_02282	0.29	-1.4
2,542,772	+		MIT1002_02282	0.29	-1.7
2,542,772	+		MIT1002_02282	0.29	-0.6
2,542,775	-		MIT1002_02282	0.29	-1.0
2,542,775	-		MIT1002_02282	0.29	+0.3
2,542,775	-		MIT1002_02282	0.29	+3.5
2,542,775	-		MIT1002_02282	0.29	+0.1
2,542,775	-		MIT1002_02282	0.29	-1.0
2,542,780	-		MIT1002_02282	0.29	-2.3
2,542,781	-		MIT1002_02282	0.29	+1.0
2,542,832	-		MIT1002_02282	0.31	+0.4
2,542,884	+		MIT1002_02282	0.34	-1.4
2,542,964	+		MIT1002_02282	0.37	-1.5
2,542,973	+		MIT1002_02282	0.38	+0.9
2,543,027	+		MIT1002_02282	0.40	-0.2
2,543,027	+		MIT1002_02282	0.40	-0.2
2,543,027	+		MIT1002_02282	0.40	+0.9
2,543,035	-		MIT1002_02282	0.41	+0.2
2,543,040	-		MIT1002_02282	0.41	-2.2
2,543,224	+		MIT1002_02282	0.50	+1.0
2,543,232	-		MIT1002_02282	0.50	-1.3
2,543,258	+		MIT1002_02282	0.51	-0.3
2,543,266	-		MIT1002_02282	0.51	-0.7
2,543,292	+		MIT1002_02282	0.53	+1.3
2,543,487	-		MIT1002_02282	0.62	+0.3
2,543,503	-		MIT1002_02282	0.62	+2.3
2,543,503	-		MIT1002_02282	0.62	+0.1
2,543,561	-		MIT1002_02282	0.65	+1.6
2,543,680	+		MIT1002_02282	0.71	+0.0
2,543,687	-		MIT1002_02282	0.71	-2.4
2,543,733	+		MIT1002_02282	0.73	-0.3
2,543,759	-		MIT1002_02282	0.74	-0.6
2,543,761	-		MIT1002_02282	0.74	+0.7
2,543,805	-		MIT1002_02282	0.76	+2.6
2,543,862	-		MIT1002_02282	0.79	-1.4
2,543,938	-		MIT1002_02282	0.83	+0.8
2,543,980	+		MIT1002_02282	0.84	-0.4
2,544,036	+		MIT1002_02282	0.87	+0.5
2,544,044	-		MIT1002_02282	0.87	-0.5
2,544,045	+		MIT1002_02282	0.87	-0.8
2,544,069	+		MIT1002_02282	0.89	-0.2
2,544,074	+		MIT1002_02282	0.89	+0.4
2,544,104	+				+2.1
2,544,110	+				+0.4
2,544,121	+				+2.2
2,544,134	-				-2.7
2,544,159	+				+1.4
2,544,161	+				+0.4
2,544,224	+				-0.9
2,544,227	-				-1.3
2,544,261	+				+0.0
2,544,270	-				-0.9
2,544,270	-				-1.2
2,544,270	-				+0.5
2,544,270	-				-0.3
2,544,381	-				-1.7
2,544,381	-				-0.1
2,544,397	+				-0.3
2,544,397	+				-0.4
2,544,427	+				+0.2
2,544,432	+				-0.3
2,544,464	-				-1.2
2,544,514	+				+0.6
2,544,521	+				+1.7
2,544,682	-		MIT1002_02283	0.10	-0.7
2,544,684	+		MIT1002_02283	0.10	-0.2
2,544,697	+		MIT1002_02283	0.11	-0.2
2,544,705	-		MIT1002_02283	0.11	+0.4
2,544,790	+		MIT1002_02283	0.14	+0.5
2,544,799	-		MIT1002_02283	0.14	-0.2
2,544,815	-		MIT1002_02283	0.14	+2.7
2,544,884	+		MIT1002_02283	0.17	+1.7
2,544,884	+		MIT1002_02283	0.17	-1.7
2,544,892	-		MIT1002_02283	0.17	+0.9
2,544,892	-		MIT1002_02283	0.17	-0.2
2,544,892	-		MIT1002_02283	0.17	+0.4
2,544,924	+		MIT1002_02283	0.18	+0.0
2,544,944	+		MIT1002_02283	0.19	-0.1
2,544,952	-		MIT1002_02283	0.19	-1.2
2,544,989	+		MIT1002_02283	0.20	+0.1
2,545,169	+		MIT1002_02283	0.26	+0.1
2,545,177	+		MIT1002_02283	0.26	-0.1
2,545,177	-		MIT1002_02283	0.26	+1.2
2,545,177	-		MIT1002_02283	0.26	+1.7
2,545,177	-		MIT1002_02283	0.26	+0.4
2,545,177	-		MIT1002_02283	0.26	+0.5
2,545,180	-		MIT1002_02283	0.26	-4.2
2,545,314	+		MIT1002_02283	0.30	+1.1