Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02270

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 5
2,527,491	+				-1.3
2,527,492	-				-0.1
2,527,494	-				+0.8
2,527,499	-				-1.4
2,527,553	+				+2.0
2,527,576	-				-0.6
2,527,594	-				-1.8
2,527,604	-				-1.5
2,527,608	+				-0.0
2,527,611	+				+1.7
2,527,619	-				+0.9
2,527,787	+				-0.3
2,527,795	-				-1.1
2,527,818	-				-1.0
2,527,823	+				+0.0
2,527,828	+				+1.4
2,527,879	-				-1.3
2,528,003	+		MIT1002_02270	0.12	+0.4
2,528,008	+		MIT1002_02270	0.12	+0.5
2,528,011	-		MIT1002_02270	0.12	+1.5
2,528,019	-		MIT1002_02270	0.13	+0.4
2,528,021	-		MIT1002_02270	0.13	+0.2
2,528,024	+		MIT1002_02270	0.13	-0.5
2,528,250	-		MIT1002_02270	0.23	-0.2
2,528,252	+		MIT1002_02270	0.24	+0.3
2,528,276	+		MIT1002_02270	0.25	-0.2
2,528,284	-		MIT1002_02270	0.25	-1.1
2,528,350	+		MIT1002_02270	0.28	-2.8
2,528,436	+		MIT1002_02270	0.32	+0.3
2,528,472	+		MIT1002_02270	0.34	-0.8
2,528,480	-		MIT1002_02270	0.34	-0.7
2,528,480	-		MIT1002_02270	0.34	+1.6
2,528,518	-		MIT1002_02270	0.36	+1.5
2,528,554	-		MIT1002_02270	0.38	+0.4
2,528,602	-		MIT1002_02270	0.40	+3.1
2,528,618	+		MIT1002_02270	0.40	+1.6
2,528,621	-		MIT1002_02270	0.41	+1.0
2,528,626	-		MIT1002_02270	0.41	+0.2
2,528,678	-		MIT1002_02270	0.43	+0.4
2,528,771	-		MIT1002_02270	0.48	-1.4
2,528,784	-		MIT1002_02270	0.48	+3.3
2,528,799	+		MIT1002_02270	0.49	+1.7
2,528,876	-		MIT1002_02270	0.52	+0.1
2,528,919	+		MIT1002_02270	0.54	+1.1
2,528,947	+		MIT1002_02270	0.56	+0.7
2,529,043	+		MIT1002_02270	0.60	+0.3
2,529,051	-		MIT1002_02270	0.60	+1.0
2,529,073	-		MIT1002_02270	0.61	-2.8
2,529,116	+		MIT1002_02270	0.63	+0.5
2,529,124	-		MIT1002_02270	0.64	-0.5
2,529,330	+		MIT1002_02270	0.73	-0.2
2,529,338	-		MIT1002_02270	0.74	-1.2
2,529,338	-		MIT1002_02270	0.74	+2.7
2,529,400	+		MIT1002_02270	0.77	+0.1
2,529,400	+		MIT1002_02270	0.77	-0.7
2,529,481	+		MIT1002_02270	0.80	-0.0
2,529,494	-		MIT1002_02270	0.81	-1.4
2,529,508	+		MIT1002_02270	0.82	-1.4
2,529,588	-		MIT1002_02270	0.85	+0.4
2,529,588	-		MIT1002_02270	0.85	-1.8
2,529,657	-		MIT1002_02270	0.88	-1.2
2,529,746	-				+0.3
2,529,828	-				-0.6
2,529,858	+				-2.7
2,529,896	-				-1.0